Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   AAIS09_RS04390 Genome accession   NZ_CP154595
Coordinates   856571..857221 (+) Length   216 a.a.
NCBI ID   WP_057546897.1    Uniprot ID   A0A4J1WRN7
Organism   Streptococcus pneumoniae strain serotype 4     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 851571..862221
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAIS09_RS04360 (AAIS09_04345) - 852054..852269 (+) 216 WP_001232081.1 YozE family protein -
  AAIS09_RS04365 (AAIS09_04350) - 852355..853323 (+) 969 WP_000658191.1 PhoH family protein -
  AAIS09_RS04370 (AAIS09_04355) - 853516..854016 (+) 501 WP_001866231.1 GNAT family N-acetyltransferase -
  AAIS09_RS04375 (AAIS09_04360) - 854019..854345 (+) 327 Protein_860 TfoX/Sxy family protein -
  AAIS09_RS04380 (AAIS09_04365) ald 854646..855757 (-) 1112 Protein_861 alanine dehydrogenase -
  AAIS09_RS04385 (AAIS09_04370) - 855934..856503 (+) 570 WP_061813581.1 GNAT family N-acetyltransferase -
  AAIS09_RS04390 (AAIS09_04375) comEA/celA/cilE 856571..857221 (+) 651 WP_057546897.1 ComEA family DNA-binding protein Machinery gene
  AAIS09_RS04395 (AAIS09_04380) comEC/celB 857205..859445 (+) 2241 WP_061813580.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  AAIS09_RS04400 (AAIS09_04385) - 859624..859812 (+) 189 WP_061813579.1 hypothetical protein -
  AAIS09_RS04405 (AAIS09_04390) - 859845..860432 (+) 588 WP_000939895.1 ATP-binding cassette domain-containing protein -
  AAIS09_RS04410 (AAIS09_04395) - 860436..861620 (+) 1185 WP_061813578.1 hypothetical protein -

Sequence


Protein


Download         Length: 216 a.a.        Molecular weight: 23238.66 Da        Isoelectric Point: 5.9204

>NTDB_id=993676 AAIS09_RS04390 WP_057546897.1 856571..857221(+) (comEA/celA/cilE) [Streptococcus pneumoniae strain serotype 4]
MEAIIEKIKEYKIIVICTGLGLLVGGFFLLKPAPQTPVKETNLQAEVAAVSKDLVSEKEVNKEEKEEPLEQDLITVDVKG
AVKSPGIYDLPVGSRVNDAVHKAGGLTEQADSKSLNLAQKVSDEALVYVPTKGEEAVSQQTGLGTASSISKEKKVNLNKA
SLEELKQVKGLGGKRAQDIIDHREANGKFKSVDELKKVSGIGGKTIEKLKDYVTVD

Nucleotide


Download         Length: 651 bp        

>NTDB_id=993676 AAIS09_RS04390 WP_057546897.1 856571..857221(+) (comEA/celA/cilE) [Streptococcus pneumoniae strain serotype 4]
ATGGAAGCAATTATCGAGAAAATCAAAGAGTATAAAATCATCGTCATCTGTACTGGTCTGGGCTTGCTTGTAGGAGGATT
TTTCCTGCTAAAACCAGCTCCACAAACACCTGTCAAAGAGACGAATTTGCAGGCTGAAGTCGCAGCTGTTTCCAAGGATT
TGGTATCCGAAAAGGAAGTGAACAAGGAAGAAAAGGAAGAACCCCTTGAACAAGATCTAATCACAGTAGATGTTAAAGGT
GCTGTCAAATCGCCAGGGATTTATGACTTGCCTGTAGGTAGTCGAGTCAATGATGCTGTTCATAAGGCTGGTGGCTTGAC
AGAGCAAGCAGACAGCAAGTCGCTCAATCTAGCTCAGAAAGTTAGTGATGAGGCTCTGGTTTACGTTCCTACTAAGGGAG
AAGAAGCAGTTAGCCAACAGACTGGTTTGGGGACAGCTTCTTCAATAAGCAAGGAAAAGAAGGTCAATCTCAACAAGGCC
AGTCTGGAAGAACTCAAGCAGGTCAAGGGACTGGGAGGAAAACGAGCTCAGGACATTATCGACCATCGTGAGGCAAATGG
CAAGTTCAAGTCAGTAGACGAGCTCAAGAAGGTCTCTGGCATTGGTGGCAAAACAATAGAAAAGCTTAAAGACTATGTTA
CAGTGGATTAA

Domains


Predicted by InterproScan.

(76-126)

(151-214)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4J1WRN7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA/celA/cilE Streptococcus pneumoniae Rx1

99.537

100

0.995

  comEA/celA/cilE Streptococcus pneumoniae D39

99.537

100

0.995

  comEA/celA/cilE Streptococcus pneumoniae R6

99.537

100

0.995

  comEA/celA/cilE Streptococcus pneumoniae TIGR4

96.759

100

0.968

  comEA/celA/cilE Streptococcus mitis NCTC 12261

95.833

100

0.958

  comEA/celA/cilE Streptococcus mitis SK321

89.815

100

0.898

  comEA Lactococcus lactis subsp. cremoris KW2

43.172

100

0.454

  comEA Bacillus subtilis subsp. subtilis str. 168

41.579

87.963

0.366

  comEA Latilactobacillus sakei subsp. sakei 23K

33.476

100

0.361


Multiple sequence alignment