Detailed information NTG0986508

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: MHI46_RS16770
• Genome accession: NZ_CP152042
• Coordinates: 3214378..3215034 (-)
• Length: 218 a.a.
• NCBI ID: WP_251181034.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL K6-1000
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3209378..3220034

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MHI46_RS16735 (MHI46_16735)	fliW	3209516..3209950 (-)	435	WP_041088051.1	flagellar assembly protein FliW	-
MHI46_RS16740 (MHI46_16740)	-	3209979..3210557 (-)	579	WP_251181036.1	DUF6470 family protein	-
MHI46_RS16745 (MHI46_16745)	flgL	3210604..3211512 (-)	909	WP_039181799.1	flagellar hook-associated protein FlgL	-
MHI46_RS16750 (MHI46_16750)	flgK	3211522..3213042 (-)	1521	WP_251181035.1	flagellar hook-associated protein FlgK	-
MHI46_RS16755 (MHI46_16755)	-	3213058..3213540 (-)	483	WP_024423619.1	flagellar protein FlgN	-
MHI46_RS16760 (MHI46_16760)	flgM	3213559..3213822 (-)	264	WP_024423620.1	flagellar biosynthesis anti-sigma factor FlgM	-
MHI46_RS16765 (MHI46_16765)	-	3213902..3214321 (-)	420	WP_039181808.1	TIGR03826 family flagellar region protein	-
MHI46_RS16770 (MHI46_16770)	comFC	3214378..3215034 (-)	657	WP_251181034.1	ComF family protein	Machinery gene
MHI46_RS16775 (MHI46_16775)	-	3215061..3215354 (-)	294	WP_058837538.1	competence protein ComFB	-
MHI46_RS16780 (MHI46_16780)	comFA	3215404..3216549 (-)	1146	WP_342502963.1	DEAD/DEAH box helicase	Machinery gene
MHI46_RS16785 (MHI46_16785)	-	3216922..3217764 (-)	843	WP_039181815.1	DegV family protein	-
MHI46_RS16790 (MHI46_16790)	degU	3217981..3218670 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
MHI46_RS16795 (MHI46_16795)	degS	3218735..3219910 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 218 a.a.
• Molecular weight: 25032.19 Da
• Isoelectric Point: 10.1430

>NTDB_id=986508 MHI46_RS16770 WP_251181034.1 3214378..3215034(-) (comFC) [Bacillus sp. FSL K6-1000]
MPAFTWKSFLLLNDDRLCVACKNDLVKIERPICPTCGRAQSNDQMCQDCNRWNERHDSTKILVKNRSVYTYNELMKDVLA
RFKFRGDTALVELFKRDVQAAFKHSFSIKEPLLIPIPLSHERLKERGFNQSVIIASLIGKPILQPLVKIHQSKQSKKKKN
ERLDQKGLFQIKHTDVIVQRDIILVDDIYTTGATIYDAARILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 657 bp

>NTDB_id=986508 MHI46_RS16770 WP_251181034.1 3214378..3215034(-) (comFC) [Bacillus sp. FSL K6-1000]
GTGCCGGCTTTTACATGGAAATCATTCCTACTATTAAATGATGATCGTCTTTGTGTAGCATGTAAGAATGACTTAGTAAA
GATTGAGCGTCCTATTTGTCCAACGTGTGGAAGGGCGCAGTCAAATGACCAAATGTGCCAGGACTGCAATAGATGGAATG
AACGCCATGATTCTACTAAAATTCTTGTGAAAAATAGGTCAGTTTATACTTACAATGAGTTGATGAAAGATGTCCTTGCC
CGCTTTAAATTTCGGGGTGATACGGCTTTAGTTGAGCTGTTTAAACGAGATGTACAAGCAGCATTTAAACATTCCTTCAG
CATAAAAGAACCACTGCTGATTCCGATCCCTTTAAGTCATGAAAGACTAAAAGAAAGAGGATTTAATCAGTCCGTCATCA
TCGCTTCCTTGATAGGTAAGCCAATATTGCAGCCACTCGTGAAAATACATCAAAGTAAGCAGTCCAAAAAAAAGAAAAAT
GAACGCCTAGATCAAAAAGGATTGTTTCAAATAAAGCATACAGATGTGATTGTTCAAAGGGATATTATATTAGTTGATGA
TATCTATACAACGGGAGCAACCATTTATGATGCAGCAAGAATTTTAAAAGACGCAGGTGCCAAAAGTGTTTCTTCTTTTA
CGTTGATACGTAGTTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (132-216)

• Double zinc ribbon domain (DZR_2) (14-49)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	48.611	99.083	0.482
comFC/cflB	Streptococcus pneumoniae Rx1	38.14	98.624	0.376
comFC/cflB	Streptococcus pneumoniae D39	38.14	98.624	0.376
comFC/cflB	Streptococcus pneumoniae R6	38.14	98.624	0.376
comFC/cflB	Streptococcus pneumoniae TIGR4	38.14	98.624	0.376
comFC/cflB	Streptococcus mitis NCTC 12261	37.209	98.624	0.367
comFC/cflB	Streptococcus mitis SK321	37.209	98.624	0.367