Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   ACOCJF_RS09795 Genome accession   NZ_CP184555
Coordinates   1965793..1966416 (+) Length   207 a.a.
NCBI ID   WP_001208755.1    Uniprot ID   P65819
Organism   Staphylococcus aureus strain SCTW2018694     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1960793..1971416
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACOCJF_RS09765 (ACOCJF_09765) - 1961767..1962234 (-) 468 WP_000966144.1 CcdC family protein -
  ACOCJF_RS09770 (ACOCJF_09770) - 1962328..1962426 (-) 99 WP_001789897.1 hypothetical protein -
  ACOCJF_RS09775 (ACOCJF_09775) - 1962413..1962655 (-) 243 WP_000246909.1 YneF family protein -
  ACOCJF_RS09780 (ACOCJF_09780) recP/tkt 1962933..1964921 (-) 1989 WP_000481439.1 transketolase Machinery gene
  ACOCJF_RS09785 (ACOCJF_09785) - 1965042..1965281 (-) 240 WP_000071351.1 DUF896 domain-containing protein -
  ACOCJF_RS09790 (ACOCJF_09790) sosA 1965417..1965650 (-) 234 WP_000499646.1 DNA damage-induced cell division inhibitor SosA -
  ACOCJF_RS09795 (ACOCJF_09795) dinR/lexA 1965793..1966416 (+) 624 WP_001208755.1 transcriptional repressor LexA Regulator
  ACOCJF_RS09800 (ACOCJF_09800) - 1966795..1967811 (-) 1017 WP_169428106.1 CAP domain-containing protein -
  ACOCJF_RS09805 (ACOCJF_09805) guaC 1967833..1968810 (-) 978 WP_000688126.1 GMP reductase -
  ACOCJF_RS09810 (ACOCJF_09810) rpsN 1968967..1969236 (-) 270 WP_001085655.1 30S ribosomal protein S14 -
  ACOCJF_RS09815 (ACOCJF_09815) rpmG 1969690..1969839 (-) 150 WP_001265708.1 50S ribosomal protein L33 -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23331.55 Da        Isoelectric Point: 4.8811

>NTDB_id=986510 ACOCJF_RS09795 WP_001208755.1 1965793..1966416(+) (dinR/lexA) [Staphylococcus aureus strain SCTW2018694]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=986510 ACOCJF_RS09795 WP_001208755.1 1965793..1966416(+) (dinR/lexA) [Staphylococcus aureus strain SCTW2018694]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAGGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTATCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65819

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657

Multiple sequence alignment