Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   MHI41_RS08455 Genome accession   NZ_CP152023
Coordinates   1669748..1670998 (+) Length   416 a.a.
NCBI ID   WP_342494708.1    Uniprot ID   -
Organism   Bacillus sp. FSL M7-0307     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1664748..1675998
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI41_RS08430 (MHI41_08430) - 1666159..1666887 (+) 729 WP_342494707.1 SDR family oxidoreductase -
  MHI41_RS08435 (MHI41_08435) - 1666961..1667218 (+) 258 WP_008344693.1 DUF3243 domain-containing protein -
  MHI41_RS08440 (MHI41_08440) - 1667350..1668141 (+) 792 WP_003211480.1 DUF3388 domain-containing protein -
  MHI41_RS08445 (MHI41_08445) - 1668165..1669076 (+) 912 WP_019744182.1 helix-turn-helix domain-containing protein -
  MHI41_RS08450 (MHI41_08450) pgsA 1669150..1669731 (+) 582 WP_008344688.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  MHI41_RS08455 (MHI41_08455) cinA 1669748..1670998 (+) 1251 WP_342494708.1 competence/damage-inducible protein A Machinery gene
  MHI41_RS08460 (MHI41_08460) recA 1671176..1672219 (+) 1044 WP_007499478.1 recombinase RecA Machinery gene
  MHI41_RS08465 (MHI41_08465) rny 1672520..1674082 (+) 1563 WP_007499477.1 ribonuclease Y -
  MHI41_RS08470 (MHI41_08470) - 1674172..1674966 (+) 795 WP_019744184.1 TIGR00282 family metallophosphoesterase -
  MHI41_RS08475 (MHI41_08475) spoVS 1675169..1675429 (+) 261 WP_003211281.1 stage V sporulation protein SpoVS -

Sequence

Protein


Download         Length: 416 a.a.        Molecular weight: 45748.78 Da        Isoelectric Point: 4.8143

>NTDB_id=985387 MHI41_RS08455 WP_342494708.1 1669748..1670998(+) (cinA) [Bacillus sp. FSL M7-0307]
MKSERKAEIIAVGSELLLGQITNTNAQFISKQLAENGVNVYYHTAVGDNPERLKRAIQVAQERSNFIIFSGGLGPTKDDL
TKETIANTLDKELVLNEEAFESIQEYFRKTGRDMSPNNRKQALVLEGSDVFVNRFGMAPGMFIQEGDTFYILLPGPPSEL
HPMFENEAKPLISEKLGLKEKIVSVVLRFFGIGESQLETDLEDLIDAQTNPTIAPLAADGEVTLRLTAKHEDEKETERLL
KETEAQILERVGEYFYGYGDTSLAFEASKALHEHGKTVAAAESLTGGMFSEWLTDLEGASSILNGSVVCYTNQVKQQVLG
CREETLSSHGAVSKECALELAEGVRKLTGSDIGISFTGVAGPEPHEGQPVGKVFIGLSTKDQTDVFEWMFTGSRSGIRKR
AVKYGLHHLLKLLKES

Nucleotide


Download         Length: 1251 bp        

>NTDB_id=985387 MHI41_RS08455 WP_342494708.1 1669748..1670998(+) (cinA) [Bacillus sp. FSL M7-0307]
TTGAAGTCAGAGAGAAAAGCAGAAATTATTGCAGTCGGTTCCGAACTTTTGCTAGGGCAAATTACGAATACGAATGCACA
ATTCATCAGCAAACAACTAGCTGAAAATGGTGTGAATGTTTATTACCACACAGCAGTTGGTGACAATCCAGAGCGTTTAA
AAAGGGCCATTCAAGTGGCACAGGAAAGATCGAATTTTATTATCTTCTCAGGTGGTCTTGGACCAACGAAAGATGATTTA
ACAAAAGAAACCATTGCAAATACGCTCGATAAAGAGCTTGTGCTAAATGAAGAAGCATTTGAGTCTATTCAAGAGTACTT
CCGTAAAACCGGACGTGATATGTCGCCGAACAACCGTAAACAGGCGCTCGTTCTAGAGGGATCTGATGTGTTCGTAAACC
GTTTCGGAATGGCACCTGGTATGTTTATACAAGAGGGAGATACGTTTTACATTCTGCTCCCTGGACCGCCAAGTGAATTG
CACCCGATGTTTGAAAACGAAGCGAAGCCGCTTATTTCTGAAAAACTCGGCCTAAAGGAAAAAATCGTGTCTGTTGTCTT
GCGTTTCTTTGGCATCGGTGAATCTCAGCTGGAAACAGATCTTGAAGATTTAATTGATGCACAGACCAATCCAACGATTG
CACCGCTTGCAGCTGACGGGGAAGTGACGCTAAGGCTGACAGCCAAGCATGAGGATGAAAAAGAAACAGAGCGTCTGTTA
AAAGAAACAGAAGCACAAATTTTAGAACGGGTCGGCGAGTACTTCTACGGATATGGTGATACATCTCTTGCCTTTGAAGC
TTCAAAGGCCTTGCATGAACACGGGAAAACAGTAGCAGCGGCTGAAAGCCTGACTGGTGGTATGTTTTCAGAGTGGCTGA
CAGATCTTGAAGGGGCATCATCCATTTTAAACGGCAGTGTGGTTTGTTACACAAATCAAGTCAAGCAGCAAGTGCTGGGC
TGCCGTGAAGAAACATTGTCTTCTCATGGTGCTGTCAGCAAAGAGTGTGCTTTAGAGCTCGCAGAAGGCGTTAGAAAACT
GACGGGAAGCGATATCGGTATTAGCTTTACAGGTGTGGCAGGTCCTGAACCACACGAGGGACAGCCGGTTGGAAAAGTAT
TTATCGGGCTATCGACAAAAGATCAGACAGACGTGTTTGAATGGATGTTTACTGGCAGTCGATCAGGCATTCGCAAGCGT
GCTGTGAAATATGGTTTGCACCACCTTCTCAAATTATTAAAAGAAAGTTAA

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(262-412)

Probable molybdopterin binding domain (MoCF_biosynth)

(9-172)

Damage-inducible protein CinA KH domain (CinA_KH)

(186-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

74.217

99.76

0.74
  cinA Streptococcus mitis SK321

47.129

100

0.474
  cinA Streptococcus mitis NCTC 12261

46.89

100

0.471
  cinA Streptococcus pneumoniae TIGR4

46.89

100

0.471
  cinA Streptococcus mutans UA159

47.912

97.837

0.469
  cinA Streptococcus pneumoniae Rx1

46.651

100

0.469
  cinA Streptococcus pneumoniae R6

46.651

100

0.469
  cinA Streptococcus pneumoniae D39

46.411

100

0.466
  cinA Streptococcus suis isolate S10

42.857

90.865

0.389

Multiple sequence alignment