Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   MKY83_RS08730 Genome accession   NZ_CP152015
Coordinates   1742125..1743375 (+) Length   416 a.a.
NCBI ID   WP_342488517.1    Uniprot ID   -
Organism   Bacillus sp. FSL M8-0266     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1737125..1748375
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKY83_RS08705 (MKY83_08705) - 1738534..1739262 (+) 729 WP_126741675.1 SDR family oxidoreductase -
  MKY83_RS08710 (MKY83_08710) - 1739336..1739593 (+) 258 WP_003211590.1 DUF3243 domain-containing protein -
  MKY83_RS08715 (MKY83_08715) - 1739725..1740516 (+) 792 WP_003211480.1 DUF3388 domain-containing protein -
  MKY83_RS08720 (MKY83_08720) - 1740540..1741451 (+) 912 WP_003212257.1 helix-turn-helix domain-containing protein -
  MKY83_RS08725 (MKY83_08725) pgsA 1741527..1742108 (+) 582 WP_044141864.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  MKY83_RS08730 (MKY83_08730) cinA 1742125..1743375 (+) 1251 WP_342488517.1 competence/damage-inducible protein A Machinery gene
  MKY83_RS08735 (MKY83_08735) recA 1743553..1744593 (+) 1041 WP_003211102.1 recombinase RecA Machinery gene
  MKY83_RS08740 (MKY83_08740) rny 1744900..1746462 (+) 1563 WP_003211958.1 ribonuclease Y -
  MKY83_RS08745 (MKY83_08745) - 1746551..1747345 (+) 795 WP_003212177.1 TIGR00282 family metallophosphoesterase -
  MKY83_RS08750 (MKY83_08750) spoVS 1747547..1747807 (+) 261 WP_029281188.1 stage V sporulation protein SpoVS -

Sequence

Protein


Download         Length: 416 a.a.        Molecular weight: 45727.86 Da        Isoelectric Point: 4.9261

>NTDB_id=985027 MKY83_RS08730 WP_342488517.1 1742125..1743375(+) (cinA) [Bacillus sp. FSL M8-0266]
MKSERKAEIIAVGSELLLGQITNTNAQFISKQLAEIGVNVYYHTAVGDNPERLKRAIQVAQERSNFIIFSGGLGPTKDDL
TKETIAITLGKELVLNEEAFESIQEYFRKTGRDMSPNNRKQALVLEGSDVLVNRFGMAPGMFIQEDDTFYMLLPGPPSEL
HPMFENEAKPLISEKLDLKEKIVSVVLRFFGIGESQLETDLEDLIDAQTNPTIAPLASDGEVTLRLTAKHEDEKETERLL
KETEAKILARVGEYFYGYGDTSLVREASKALHEHGKTVAAAESLTGGMFSEWLTDLEGASSILSGSIVCYTNQVKQQVLG
CREETLSSHGAVSKECALELAEGARKLTGSDIGISFTGVAGPDTHEGQPVGKVFIGLSTKDHTDVFEWMFTGSRSGIRKR
AVKYGLHHLLNLLKES

Nucleotide


Download         Length: 1251 bp        

>NTDB_id=985027 MKY83_RS08730 WP_342488517.1 1742125..1743375(+) (cinA) [Bacillus sp. FSL M8-0266]
TTGAAGTCAGAGAGAAAAGCAGAAATTATTGCAGTCGGTTCCGAACTTTTGCTAGGGCAAATTACGAATACGAATGCACA
ATTCATCAGCAAACAGCTAGCTGAAATTGGTGTGAATGTGTATTACCATACAGCAGTTGGTGACAATCCAGAGCGTTTAA
AAAGGGCCATTCAAGTGGCGCAGGAAAGATCGAATTTTATTATCTTCTCAGGTGGTCTTGGACCAACGAAAGATGATTTA
ACAAAAGAAACCATCGCGATTACACTTGGAAAAGAGCTCGTGCTAAATGAAGAAGCATTTGAATCCATTCAAGAATACTT
TCGAAAGACTGGACGAGACATGTCACCGAATAACCGGAAGCAGGCACTCGTTCTAGAAGGATCTGATGTGCTCGTGAACC
GGTTTGGGATGGCCCCAGGTATGTTTATTCAAGAAGACGATACGTTTTATATGCTACTTCCTGGACCACCAAGTGAACTG
CATCCAATGTTTGAGAACGAGGCGAAGCCGCTGATATCTGAGAAACTGGACTTAAAGGAAAAAATCGTGTCTGTTGTTCT
CCGCTTTTTCGGAATCGGTGAATCACAGCTTGAAACAGACCTAGAAGATTTAATTGATGCTCAAACCAACCCAACGATTG
CACCTCTCGCATCTGACGGTGAAGTGACACTTAGGCTCACGGCTAAGCATGAGGATGAAAAAGAAACGGAGCGTCTGTTA
AAAGAGACGGAAGCGAAAATTTTAGCGCGTGTAGGAGAGTACTTCTACGGGTATGGTGATACATCACTTGTCCGTGAAGC
TTCCAAGGCCCTGCACGAACACGGGAAAACAGTGGCGGCGGCTGAGAGCCTGACAGGCGGGATGTTTTCTGAATGGCTGA
CAGACCTTGAAGGTGCATCGTCGATTTTAAGCGGCAGTATCGTTTGTTATACAAACCAAGTCAAACAGCAGGTGCTTGGC
TGCCGTGAGGAAACATTGTCTTCTCATGGTGCTGTTAGCAAAGAGTGTGCTTTAGAGCTTGCTGAAGGTGCTAGAAAGCT
TACGGGAAGTGATATTGGCATTAGCTTTACGGGTGTAGCGGGCCCTGATACCCACGAGGGACAGCCTGTCGGAAAAGTGT
TCATCGGGCTATCTACGAAAGACCACACAGACGTGTTTGAATGGATGTTTACAGGAAGCCGGTCGGGTATTCGAAAGCGC
GCTGTGAAATACGGACTGCATCACTTGCTCAATTTATTAAAAGAAAGTTAA

Domains

Predicted by InterproScan.

Damage-inducible protein CinA KH domain (CinA_KH)

(186-257)

Competence-damaged protein (CinA)

(262-412)

Probable molybdopterin binding domain (MoCF_biosynth)

(9-172)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

73.976

99.76

0.738
  cinA Streptococcus mutans UA159

48.558

100

0.486
  cinA Streptococcus mitis SK321

47.981

100

0.486
  cinA Streptococcus mitis NCTC 12261

47.743

100

0.483
  cinA Streptococcus pneumoniae TIGR4

47.743

100

0.483
  cinA Streptococcus pneumoniae Rx1

47.506

100

0.481
  cinA Streptococcus pneumoniae R6

47.506

100

0.481
  cinA Streptococcus pneumoniae D39

47.268

100

0.478
  cinA Streptococcus suis isolate S10

43.651

90.865

0.397

Multiple sequence alignment