Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   MKX67_RS10485 Genome accession   NZ_CP151998
Coordinates   2020155..2021387 (+) Length   410 a.a.
NCBI ID   WP_307314351.1    Uniprot ID   -
Organism   Cytobacillus sp. FSL W7-1323     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 2015155..2026387
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKX67_RS10460 (MKX67_10460) - 2016416..2017138 (+) 723 WP_095373472.1 SDR family oxidoreductase -
  MKX67_RS10465 (MKX67_10465) - 2017251..2017496 (+) 246 WP_095369466.1 DUF3243 domain-containing protein -
  MKX67_RS10470 (MKX67_10470) - 2017700..2018497 (+) 798 WP_095369465.1 DUF3388 domain-containing protein -
  MKX67_RS10475 (MKX67_10475) - 2018510..2019400 (+) 891 WP_095369464.1 RodZ domain-containing protein -
  MKX67_RS10480 (MKX67_10480) pgsA 2019560..2020138 (+) 579 WP_095369463.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  MKX67_RS10485 (MKX67_10485) cinA 2020155..2021387 (+) 1233 WP_307314351.1 competence/damage-inducible protein A Machinery gene
  MKX67_RS10490 (MKX67_10490) recA 2021758..2022798 (+) 1041 WP_095369461.1 recombinase RecA Machinery gene
  MKX67_RS10495 (MKX67_10495) rny 2023260..2024822 (+) 1563 WP_180316975.1 ribonuclease Y -
  MKX67_RS10500 (MKX67_10500) - 2024946..2025743 (+) 798 WP_095369459.1 TIGR00282 family metallophosphoesterase -
  MKX67_RS10505 (MKX67_10505) spoVS 2025894..2026154 (+) 261 WP_095369458.1 stage V sporulation protein SpoVS -

Sequence

Protein


Download         Length: 410 a.a.        Molecular weight: 44726.08 Da        Isoelectric Point: 4.8649

>NTDB_id=984162 MKX67_RS10485 WP_307314351.1 2020155..2021387(+) (cinA) [Cytobacillus sp. FSL W7-1323]
MNAEIIAVGSELLLGQINNTNAKFLSQQLADLGVNVFYHTVVGDNAGRLESAIKIAENRAELIIFTGGLGPTKDDLTKET
IAKHLQTNLVMDDTALASIEEYFKRTNRPMTENNRKQALVLSGAKVLPNDYGMAPGMFYQTENKQYMLLPGPPKEMEPMF
LKYGFSAIKSQSVEEAVISSRVLRFFGIGEAMLEAEIEDILDNQTNPTIAPLAGDHEVTLRLTAKHHNLDTALTLLEEKE
KEIMAVVGDYFYGYDDTSLFKELSKRMQEKKLTLSAAESLTGGMFQETFTSIPGAGGLINGGVVCYTNEVKAKVLNVKLE
TIKNEGVVSATCAKELAENVAKLMESDIGVSFTGVAGPDELEGNPVGTVYIGIYHDGEARAEKLNLGGSRTSIRKRSSLY
GAYFLLKSLA

Nucleotide


Download         Length: 1233 bp        

>NTDB_id=984162 MKX67_RS10485 WP_307314351.1 2020155..2021387(+) (cinA) [Cytobacillus sp. FSL W7-1323]
ATGAATGCTGAAATTATTGCCGTTGGCTCTGAGTTGTTATTAGGACAAATTAACAATACGAACGCCAAATTTTTATCACA
GCAGTTAGCTGACCTTGGTGTGAATGTTTTTTATCATACGGTCGTCGGAGACAATGCGGGGCGGTTAGAGTCTGCTATAA
AAATTGCTGAAAATAGAGCTGAACTCATTATCTTCACTGGTGGGCTTGGTCCGACAAAAGACGATTTAACAAAAGAAACC
ATTGCTAAGCATTTGCAAACAAATCTCGTAATGGATGATACAGCACTGGCGTCTATTGAAGAATATTTTAAACGGACGAA
TCGACCAATGACTGAAAATAATCGTAAGCAAGCCTTAGTTCTTTCTGGTGCGAAAGTACTTCCTAATGATTACGGTATGG
CACCTGGTATGTTTTATCAGACGGAAAATAAGCAATATATGCTTTTACCTGGGCCACCAAAAGAAATGGAACCGATGTTT
TTGAAATACGGATTTTCTGCAATAAAATCACAATCAGTAGAAGAAGCAGTTATCTCGTCGCGTGTCCTTAGATTCTTTGG
CATTGGTGAAGCAATGCTAGAGGCGGAAATAGAAGATATACTTGATAACCAAACAAACCCGACGATTGCGCCGTTAGCGG
GAGATCATGAAGTTACATTGAGGTTGACAGCCAAACATCATAATCTTGATACTGCTTTAACACTTTTGGAAGAAAAAGAG
AAAGAAATTATGGCAGTAGTAGGAGACTATTTTTACGGTTATGATGATACGTCGCTCTTTAAAGAGCTCTCAAAAAGAAT
GCAGGAAAAGAAATTAACCCTGTCTGCTGCGGAAAGTTTAACTGGGGGCATGTTTCAAGAAACATTTACATCGATTCCTG
GAGCTGGTGGGCTAATAAATGGTGGCGTCGTTTGTTATACAAATGAAGTAAAAGCTAAAGTACTCAATGTAAAGCTAGAG
ACAATTAAAAATGAAGGTGTTGTCAGTGCTACATGTGCAAAGGAACTTGCGGAAAATGTCGCCAAGTTAATGGAAAGTGA
CATTGGTGTAAGCTTTACGGGTGTTGCCGGACCTGATGAATTAGAAGGCAATCCAGTCGGTACCGTTTATATAGGGATTT
ATCACGATGGTGAAGCAAGAGCTGAGAAGCTCAACCTTGGTGGTTCCCGCACATCAATCAGAAAGAGGTCATCTCTTTAT
GGCGCCTATTTTCTATTGAAATCCTTGGCGTAG

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(258-408)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-163)

Damage-inducible protein CinA KH domain (CinA_KH)

(180-253)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

60.197

99.268

0.598
  cinA Streptococcus mutans UA159

43.478

100

0.439
  cinA Streptococcus pneumoniae TIGR4

42.959

100

0.439
  cinA Streptococcus mitis SK321

42.959

100

0.439
  cinA Streptococcus mitis NCTC 12261

42.721

100

0.437
  cinA Streptococcus pneumoniae Rx1

42.721

100

0.437
  cinA Streptococcus pneumoniae R6

42.721

100

0.437
  cinA Streptococcus pneumoniae D39

42.482

100

0.434
  cinA Streptococcus suis isolate S10

36.715

100

0.371

Multiple sequence alignment