Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   NSQ30_RS08765 Genome accession   NZ_CP151990
Coordinates   1748144..1749394 (+) Length   416 a.a.
NCBI ID   WP_342488517.1    Uniprot ID   -
Organism   Bacillus sp. FSL R7-0651     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1743144..1754394
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ30_RS08740 (NSQ30_08740) - 1744553..1745281 (+) 729 WP_126741675.1 SDR family oxidoreductase -
  NSQ30_RS08745 (NSQ30_08745) - 1745355..1745612 (+) 258 WP_003211590.1 DUF3243 domain-containing protein -
  NSQ30_RS08750 (NSQ30_08750) - 1745744..1746535 (+) 792 WP_003211480.1 DUF3388 domain-containing protein -
  NSQ30_RS08755 (NSQ30_08755) - 1746559..1747470 (+) 912 WP_003212257.1 helix-turn-helix domain-containing protein -
  NSQ30_RS08760 (NSQ30_08760) pgsA 1747546..1748127 (+) 582 WP_044141864.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  NSQ30_RS08765 (NSQ30_08765) cinA 1748144..1749394 (+) 1251 WP_342488517.1 competence/damage-inducible protein A Machinery gene
  NSQ30_RS08770 (NSQ30_08770) recA 1749572..1750612 (+) 1041 WP_003211102.1 recombinase RecA Machinery gene
  NSQ30_RS08775 (NSQ30_08775) rny 1750919..1752481 (+) 1563 WP_003211958.1 ribonuclease Y -
  NSQ30_RS08780 (NSQ30_08780) - 1752570..1753364 (+) 795 WP_003212177.1 TIGR00282 family metallophosphoesterase -
  NSQ30_RS08785 (NSQ30_08785) spoVS 1753566..1753826 (+) 261 WP_029281188.1 stage V sporulation protein SpoVS -

Sequence

Protein


Download         Length: 416 a.a.        Molecular weight: 45727.86 Da        Isoelectric Point: 4.9261

>NTDB_id=983797 NSQ30_RS08765 WP_342488517.1 1748144..1749394(+) (cinA) [Bacillus sp. FSL R7-0651]
MKSERKAEIIAVGSELLLGQITNTNAQFISKQLAEIGVNVYYHTAVGDNPERLKRAIQVAQERSNFIIFSGGLGPTKDDL
TKETIAITLGKELVLNEEAFESIQEYFRKTGRDMSPNNRKQALVLEGSDVLVNRFGMAPGMFIQEDDTFYMLLPGPPSEL
HPMFENEAKPLISEKLDLKEKIVSVVLRFFGIGESQLETDLEDLIDAQTNPTIAPLASDGEVTLRLTAKHEDEKETERLL
KETEAKILARVGEYFYGYGDTSLVREASKALHEHGKTVAAAESLTGGMFSEWLTDLEGASSILSGSIVCYTNQVKQQVLG
CREETLSSHGAVSKECALELAEGARKLTGSDIGISFTGVAGPDTHEGQPVGKVFIGLSTKDHTDVFEWMFTGSRSGIRKR
AVKYGLHHLLNLLKES

Nucleotide


Download         Length: 1251 bp        

>NTDB_id=983797 NSQ30_RS08765 WP_342488517.1 1748144..1749394(+) (cinA) [Bacillus sp. FSL R7-0651]
TTGAAGTCAGAGAGAAAAGCAGAAATTATTGCAGTCGGTTCCGAACTTTTGCTAGGGCAAATTACGAATACGAATGCACA
ATTCATCAGCAAACAGCTAGCTGAAATTGGTGTGAATGTGTATTACCATACAGCAGTTGGTGACAATCCAGAGCGTTTAA
AAAGGGCCATTCAAGTGGCGCAGGAAAGATCGAATTTTATTATCTTCTCAGGTGGTCTTGGACCAACGAAAGATGATTTA
ACAAAAGAAACCATCGCGATTACACTTGGAAAAGAGCTCGTGCTAAATGAAGAAGCATTTGAATCCATTCAAGAATACTT
TCGAAAGACTGGACGAGACATGTCACCGAATAACCGGAAGCAGGCACTCGTTCTAGAAGGATCTGATGTGCTCGTGAACC
GGTTTGGGATGGCCCCAGGTATGTTTATTCAAGAAGACGATACGTTTTATATGCTACTTCCTGGACCACCAAGTGAACTG
CATCCAATGTTTGAGAACGAGGCGAAGCCGCTGATATCTGAGAAACTGGACTTAAAGGAAAAAATCGTGTCTGTTGTTCT
CCGCTTTTTCGGAATCGGTGAATCACAGCTTGAAACAGACCTAGAAGATTTAATTGATGCTCAAACCAACCCAACGATTG
CACCTCTCGCATCTGACGGTGAAGTGACACTTAGGCTCACGGCTAAGCATGAGGATGAAAAAGAAACGGAGCGTCTGTTA
AAAGAGACGGAAGCGAAAATTTTAGCGCGTGTAGGAGAGTACTTCTACGGGTATGGTGATACATCACTTGTCCGTGAAGC
TTCCAAGGCCCTGCACGAACACGGGAAAACAGTGGCGGCGGCTGAGAGCCTGACAGGCGGGATGTTTTCTGAATGGCTGA
CAGACCTTGAAGGTGCATCGTCGATTTTAAGCGGCAGTATCGTTTGTTATACAAACCAAGTCAAACAGCAGGTGCTTGGC
TGCCGTGAGGAAACATTGTCTTCTCATGGTGCTGTTAGCAAAGAGTGTGCTTTAGAGCTTGCTGAAGGTGCTAGAAAGCT
TACGGGAAGTGATATTGGCATTAGCTTTACGGGTGTAGCGGGCCCTGATACCCACGAGGGACAGCCTGTCGGAAAAGTGT
TCATCGGGCTATCTACGAAAGACCACACAGACGTGTTTGAATGGATGTTTACAGGAAGCCGGTCGGGTATTCGAAAGCGC
GCTGTGAAATACGGACTGCATCACTTGCTCAATTTATTAAAAGAAAGTTAA

Domains

Predicted by InterproScan.

Damage-inducible protein CinA KH domain (CinA_KH)

(186-257)

Competence-damaged protein (CinA)

(262-412)

Probable molybdopterin binding domain (MoCF_biosynth)

(9-172)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

73.976

99.76

0.738
  cinA Streptococcus mutans UA159

48.558

100

0.486
  cinA Streptococcus mitis SK321

47.981

100

0.486
  cinA Streptococcus mitis NCTC 12261

47.743

100

0.483
  cinA Streptococcus pneumoniae TIGR4

47.743

100

0.483
  cinA Streptococcus pneumoniae Rx1

47.506

100

0.481
  cinA Streptococcus pneumoniae R6

47.506

100

0.481
  cinA Streptococcus pneumoniae D39

47.268

100

0.478
  cinA Streptococcus suis isolate S10

43.651

90.865

0.397

Multiple sequence alignment