Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   NSQ51_RS06250 Genome accession   NZ_CP151966
Coordinates   1187099..1188343 (+) Length   414 a.a.
NCBI ID   WP_049626371.1    Uniprot ID   A0A178TB02
Organism   Geobacillus sp. FSL K6-0789     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1182099..1193343
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ51_RS06225 (NSQ51_06225) - 1183540..1184256 (+) 717 WP_033012192.1 SDR family oxidoreductase -
  NSQ51_RS06230 (NSQ51_06230) - 1184324..1184572 (+) 249 WP_033016862.1 DUF3243 domain-containing protein -
  NSQ51_RS06235 (NSQ51_06235) - 1184701..1185492 (+) 792 WP_049624706.1 DUF3388 domain-containing protein -
  NSQ51_RS06240 (NSQ51_06240) - 1185519..1186412 (+) 894 WP_049624707.1 RodZ domain-containing protein -
  NSQ51_RS06245 (NSQ51_06245) pgsA 1186493..1187071 (+) 579 WP_033016861.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  NSQ51_RS06250 (NSQ51_06250) cinA 1187099..1188343 (+) 1245 WP_049626371.1 competence/damage-inducible protein A Machinery gene
  NSQ51_RS06255 (NSQ51_06255) - 1188521..1188889 (+) 369 Protein_1173 ATPase domain-containing protein -
  NSQ51_RS06260 (NSQ51_06260) - 1189603..1189980 (+) 378 WP_033012180.1 HNH endonuclease signature motif containing protein -
  NSQ51_RS06265 (NSQ51_06265) recA 1190008..1190841 (+) 834 WP_033012178.1 recombinase RecA Machinery gene
  NSQ51_RS06270 (NSQ51_06270) - 1191230..1192597 (+) 1368 WP_342462722.1 ISLre2-like element ISGsp3 family transposase -

Sequence

Protein


Download         Length: 414 a.a.        Molecular weight: 44944.84 Da        Isoelectric Point: 7.3270

>NTDB_id=982491 NSQ51_RS06250 WP_049626371.1 1187099..1188343(+) (cinA) [Geobacillus sp. FSL K6-0789]
MNAEIIAVGSELLLGQIANTNAQFLSQQLAMFGINVYFHTVVGDNAGRLEQAVKTAQTRANLIIFTGGLGPTKDDLTKET
IARLLGRRLVIDEEALRAIEVYFARTNRPMTENNKKQALVLEGSTVLKNEHGMAPGMALVADGITYMLLPGPPKEMRPMF
KKYGNAFLRRTFSLSERIESRVLRFFGIGESALETAIADLIDAQSNPTIAPLANDGEVTLRLTAKHRDQAKAKRLLDEAE
AAILTRVGRYCYGYNDETLFTKTLARLKERGWTIAAAESLTGGMFLEELTAVPGASAAVRGGVVCYTNGVKEHILGVPRP
LLETDGAVSEPCARLLAENVRTMCDADIGISFTGVAGPDPLEGHPPGTVYVGIAMRGRDTVVHRLTLSGTRDAIRIRTAK
YGCFFLLEMLAADC

Nucleotide


Download         Length: 1245 bp        

>NTDB_id=982491 NSQ51_RS06250 WP_049626371.1 1187099..1188343(+) (cinA) [Geobacillus sp. FSL K6-0789]
TTGAACGCGGAGATCATTGCCGTTGGCTCTGAGCTGTTGCTTGGGCAAATCGCCAATACGAACGCCCAGTTTTTGTCGCA
GCAGCTGGCGATGTTTGGCATTAACGTCTATTTCCATACCGTCGTCGGCGACAACGCCGGCCGCCTTGAGCAGGCGGTGA
AAACGGCGCAAACGAGAGCGAACCTCATCATTTTCACCGGCGGCCTCGGCCCGACGAAAGACGATTTGACGAAGGAGACG
ATCGCCCGCCTGCTCGGCCGCCGGCTCGTGATCGACGAGGAAGCGCTCCGAGCGATTGAGGTGTATTTTGCCCGCACAAA
CCGGCCGATGACAGAAAACAATAAAAAGCAGGCGCTCGTCTTGGAAGGATCGACGGTGCTGAAAAACGAGCACGGCATGG
CGCCAGGGATGGCGCTTGTGGCAGACGGCATTACGTACATGCTGCTGCCCGGGCCGCCGAAAGAAATGCGGCCGATGTTC
AAAAAATACGGAAACGCCTTTTTGCGCCGTACGTTTTCGCTTTCCGAGCGCATCGAGTCGCGCGTCCTCCGCTTTTTCGG
CATCGGCGAGTCGGCGCTCGAGACGGCGATCGCCGACTTGATCGACGCCCAGTCGAACCCGACGATCGCCCCGCTTGCAA
ACGACGGTGAGGTAACGCTCCGTCTGACGGCGAAACATCGGGATCAGGCGAAAGCCAAGCGGCTGCTCGACGAGGCGGAA
GCCGCCATTTTGACGCGCGTCGGCCGTTATTGTTACGGGTATAATGATGAAACGCTGTTTACAAAGACATTGGCACGGTT
AAAAGAAAGAGGATGGACAATCGCTGCAGCGGAAAGCTTGACTGGAGGCATGTTCCTTGAAGAGCTGACAGCTGTGCCGG
GGGCGTCGGCTGCTGTGCGCGGCGGCGTTGTCTGTTACACAAACGGCGTAAAAGAACACATCCTTGGCGTGCCGCGGCCG
CTGCTGGAGACGGACGGAGCGGTAAGCGAACCGTGCGCACGCCTGCTCGCTGAGAACGTGCGCACGATGTGCGATGCGGA
TATCGGCATCAGCTTCACCGGCGTCGCCGGCCCCGATCCGCTTGAGGGCCATCCGCCGGGCACCGTGTATGTCGGCATCG
CCATGCGCGGGCGCGACACCGTCGTCCACCGCCTCACCTTATCCGGCACGCGTGATGCCATTCGCATCCGCACCGCCAAA
TACGGCTGTTTTTTTCTGCTTGAGATGCTCGCGGCCGACTGCTGA

Domains

Predicted by InterproScan.

Probable molybdopterin binding domain (MoCF_biosynth)

(5-167)

Competence-damaged protein (CinA)

(258-409)

Damage-inducible protein CinA KH domain (CinA_KH)

(180-253)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A178TB02

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

59.169

98.792

0.585
  cinA Streptococcus mitis SK321

49.361

94.444

0.466
  cinA Streptococcus mitis NCTC 12261

48.492

96.135

0.466
  cinA Streptococcus pneumoniae TIGR4

48.492

96.135

0.466
  cinA Streptococcus pneumoniae Rx1

48.492

96.135

0.466
  cinA Streptococcus pneumoniae R6

48.492

96.135

0.466
  cinA Streptococcus pneumoniae D39

48.241

96.135

0.464
  cinA Streptococcus mutans UA159

47.368

96.377

0.457
  cinA Streptococcus suis isolate S10

42.857

91.304

0.391

Multiple sequence alignment