Detailed information NTG0098143

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: R8586_RS10345
• Genome accession: NZ_AP026922
• Coordinates: 1962970..1963374 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588017.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700038
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1957970..1968374

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8586_RS10315 (PC0038_20260)	comYH	1958510..1959463 (-)	954	WP_000345118.1	class I SAM-dependent methyltransferase	Machinery gene
R8586_RS10320	-	1959809..1960610 (+)	802	WP_128887635.1	IS5 family transposase	-
R8586_RS10325 (PC0038_20290)	-	1960761..1961237 (+)	477	WP_000777686.1	GNAT family N-acetyltransferase	-
R8586_RS10330 (PC0038_20300)	comGG/cglG	1961911..1962303 (-)	393	WP_001818966.1	competence type IV pilus minor pilin ComGG	Machinery gene
R8586_RS10335 (PC0038_20310)	comGF/cglF	1962281..1962742 (-)	462	WP_000250537.1	competence type IV pilus minor pilin ComGF	Machinery gene
R8586_RS10340 (PC0038_20320)	comGE/cglE	1962705..1963007 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
R8586_RS10345 (PC0038_20330)	comGD/cglD	1962970..1963374 (-)	405	WP_000588017.1	competence type IV pilus minor pilin ComGD	Machinery gene
R8586_RS10350 (PC0038_20340)	comGC/cglC	1963367..1963693 (-)	327	WP_000738625.1	competence type IV pilus major pilin ComGC	Machinery gene
R8586_RS10355 (PC0038_20350)	comGB/cglB	1963695..1964711 (-)	1017	WP_001844019.1	competence type IV pilus assembly protein ComGB	Machinery gene
R8586_RS10360 (PC0038_20360)	comGA/cglA/cilD	1964659..1965600 (-)	942	WP_000249571.1	competence type IV pilus ATPase ComGA	Machinery gene
R8586_RS10365 (PC0038_20370)	-	1965676..1966041 (-)	366	WP_000286415.1	DUF1033 family protein	-
R8586_RS10370 (PC0038_20380)	-	1966192..1967250 (-)	1059	WP_000649471.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14668.91 Da
• Isoelectric Point: 10.2164

>NTDB_id=98143 R8586_RS10345 WP_000588017.1 1962970..1963374(-) (comGD/cglD) [Streptococcus pneumoniae strain PZ900700038]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQMISNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=98143 R8586_RS10345 WP_000588017.1 1962970..1963374(-) (comGD/cglD) [Streptococcus pneumoniae strain PZ900700038]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTCCAGTCCACTTTTGCAGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCTAGTCAACAAAAGACTAGTCTGAACTTGGATGGGCAGATGATTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae Rx1	99.254	100	0.993
comGD/cglD	Streptococcus pneumoniae D39	99.254	100	0.993
comGD/cglD	Streptococcus pneumoniae R6	99.254	100	0.993
comGD/cglD	Streptococcus pneumoniae TIGR4	97.015	100	0.97
comGD/cglD	Streptococcus mitis SK321	97.015	100	0.97
comGD/cglD	Streptococcus mitis NCTC 12261	97.744	99.254	0.97
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	50	95.522	0.478
comYD	Streptococcus mutans UA159	50	95.522	0.478