Detailed information NTG0098065

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: R9C51_RS10155
• Genome accession: NZ_AP026921
• Coordinates: 1946060..1946464 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588023.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700027
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1941060..1951464

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R9C51_RS10115 (PC0027_19740)	rnpA	1941474..1941845 (-)	372	WP_000739246.1	ribonuclease P protein component	-
R9C51_RS10120	-	1941862..1941993 (-)	132	WP_000768904.1	hypothetical protein	-
R9C51_RS10125 (PC0027_19750)	-	1941994..1943184 (-)	1191	WP_000167753.1	acetate kinase	-
R9C51_RS10130 (PC0027_19760)	comYH	1943235..1944188 (-)	954	WP_000345126.1	class I SAM-dependent methyltransferase	Machinery gene
R9C51_RS10135	-	1944249..1944843 (-)	595	Protein_1976	class I SAM-dependent methyltransferase	-
R9C51_RS10140 (PC0027_19790)	comGG/cglG	1944980..1945393 (-)	414	WP_000265620.1	competence type IV pilus minor pilin ComGG	Machinery gene
R9C51_RS10145 (PC0027_19800)	comGF/cglF	1945371..1945832 (-)	462	WP_000250540.1	competence type IV pilus minor pilin ComGF	Machinery gene
R9C51_RS10150 (PC0027_19810)	comGE/cglE	1945795..1946097 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
R9C51_RS10155 (PC0027_19820)	comGD/cglD	1946060..1946464 (-)	405	WP_000588023.1	competence type IV pilus minor pilin ComGD	Machinery gene
R9C51_RS10160 (PC0027_19830)	comGC/cglC	1946457..1946783 (-)	327	WP_000738630.1	comG operon protein ComGC	Machinery gene
R9C51_RS10165 (PC0027_19840)	comGB/cglB	1946785..1947801 (-)	1017	WP_075218762.1	competence type IV pilus assembly protein ComGB	Machinery gene
R9C51_RS10170 (PC0027_19850)	comGA/cglA/cilD	1947749..1948690 (-)	942	WP_000249571.1	competence type IV pilus ATPase ComGA	Machinery gene
R9C51_RS10175 (PC0027_19860)	-	1948766..1949131 (-)	366	WP_000286415.1	DUF1033 family protein	-
R9C51_RS10180 (PC0027_19870)	-	1949282..1950340 (-)	1059	WP_000649466.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14638.82 Da
• Isoelectric Point: 10.2164

>NTDB_id=98065 R9C51_RS10155 WP_000588023.1 1946060..1946464(-) (comGD/cglD) [Streptococcus pneumoniae strain PZ900700027]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTLSNGSQKLTV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=98065 R9C51_RS10155 WP_000588023.1 1946060..1946464(-) (comGD/cglD) [Streptococcus pneumoniae strain PZ900700027]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCGGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGACAGTT
CCTAAAGGAATTCAGGCACCATCAGGCCAAAGTATTACATTTGACCGAGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	98.507	100	0.985
comGD/cglD	Streptococcus pneumoniae Rx1	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae D39	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae R6	97.761	100	0.978
comGD/cglD	Streptococcus mitis SK321	97.015	100	0.97
comGD/cglD	Streptococcus mitis NCTC 12261	97.744	99.254	0.97
comYD	Streptococcus gordonii str. Challis substr. CH1	58.268	94.776	0.552
comYD	Streptococcus mutans UA140	49.219	95.522	0.47
comYD	Streptococcus mutans UA159	49.219	95.522	0.47