Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | AAFA26_RS16555 | Genome accession | NZ_CP151705 |
| Coordinates | 3498556..3499041 (-) | Length | 161 a.a. |
| NCBI ID | WP_220042346.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain F19-02 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3493556..3504041
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAFA26_RS16535 (AAFA26_16535) | - | 3495213..3495596 (+) | 384 | WP_000090000.1 | RidA family protein | - |
| AAFA26_RS16540 (AAFA26_16540) | - | 3495806..3496000 (+) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| AAFA26_RS16545 (AAFA26_16545) | bfr | 3496246..3496710 (+) | 465 | WP_000678123.1 | bacterioferritin | - |
| AAFA26_RS16550 (AAFA26_16550) | - | 3496752..3498380 (-) | 1629 | WP_002015646.1 | O-antigen ligase family protein | - |
| AAFA26_RS16555 (AAFA26_16555) | pilA | 3498556..3499041 (-) | 486 | WP_220042346.1 | pilin | Machinery gene |
| AAFA26_RS16560 (AAFA26_16560) | - | 3499383..3499943 (-) | 561 | WP_000258950.1 | TPM domain-containing protein | - |
| AAFA26_RS16565 (AAFA26_16565) | - | 3499937..3501019 (-) | 1083 | WP_001246384.1 | TPM domain-containing protein | - |
| AAFA26_RS16570 (AAFA26_16570) | - | 3501041..3501631 (-) | 591 | WP_000846931.1 | LemA family protein | - |
| AAFA26_RS16575 (AAFA26_16575) | - | 3501761..3502648 (-) | 888 | WP_001017328.1 | metal-dependent hydrolase | - |
Sequence
Protein
Download Length: 161 a.a. Molecular weight: 16621.94 Da Isoelectric Point: 5.0937
>NTDB_id=980328 AAFA26_RS16555 WP_220042346.1 3498556..3499041(-) (pilA) [Acinetobacter baumannii strain F19-02]
MNAQKGFTLIELMIVVAIIGILAAIAIPQYQNYVGRSNVAAAVQTLTSNKSGLESYVMEFGEFPDGTTAPAAGDPTANPP
VAATRGERPQDLSIVNTTLGSIALGDKNNGAGIITLTFATGNPGIKGKKVQLARDANGTWTCVTDVDEKFAAKACPVGTP
Q
MNAQKGFTLIELMIVVAIIGILAAIAIPQYQNYVGRSNVAAAVQTLTSNKSGLESYVMEFGEFPDGTTAPAAGDPTANPP
VAATRGERPQDLSIVNTTLGSIALGDKNNGAGIITLTFATGNPGIKGKKVQLARDANGTWTCVTDVDEKFAAKACPVGTP
Q
Nucleotide
Download Length: 486 bp
>NTDB_id=980328 AAFA26_RS16555 WP_220042346.1 3498556..3499041(-) (pilA) [Acinetobacter baumannii strain F19-02]
ATGAATGCACAAAAAGGTTTTACGTTAATTGAACTCATGATCGTGGTTGCCATTATCGGTATCTTGGCAGCAATTGCGAT
TCCGCAATATCAAAATTATGTGGGTCGCTCTAATGTAGCAGCAGCTGTCCAAACACTTACATCAAATAAATCTGGTTTAG
AAAGTTATGTAATGGAATTTGGTGAATTCCCTGACGGTACTACGGCTCCAGCTGCAGGAGATCCAACAGCGAACCCACCA
GTAGCTGCTACTCGAGGTGAGCGACCACAGGATTTAAGTATTGTTAATACAACATTAGGAAGTATTGCTTTAGGTGATAA
AAACAATGGAGCTGGCATTATCACTTTAACATTTGCGACAGGCAATCCTGGTATTAAAGGCAAAAAGGTTCAGTTAGCTC
GTGATGCAAATGGAACTTGGACATGTGTAACTGATGTTGATGAGAAATTTGCAGCCAAAGCTTGTCCAGTAGGAACACCA
CAATAA
ATGAATGCACAAAAAGGTTTTACGTTAATTGAACTCATGATCGTGGTTGCCATTATCGGTATCTTGGCAGCAATTGCGAT
TCCGCAATATCAAAATTATGTGGGTCGCTCTAATGTAGCAGCAGCTGTCCAAACACTTACATCAAATAAATCTGGTTTAG
AAAGTTATGTAATGGAATTTGGTGAATTCCCTGACGGTACTACGGCTCCAGCTGCAGGAGATCCAACAGCGAACCCACCA
GTAGCTGCTACTCGAGGTGAGCGACCACAGGATTTAAGTATTGTTAATACAACATTAGGAAGTATTGCTTTAGGTGATAA
AAACAATGGAGCTGGCATTATCACTTTAACATTTGCGACAGGCAATCCTGGTATTAAAGGCAAAAAGGTTCAGTTAGCTC
GTGATGCAAATGGAACTTGGACATGTGTAACTGATGTTGATGAGAAATTTGCAGCCAAAGCTTGTCCAGTAGGAACACCA
CAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
48.75 |
99.379 |
0.484 |
| pilA | Pseudomonas aeruginosa PAK |
46.541 |
98.758 |
0.46 |
| pilA | Vibrio cholerae C6706 |
45.223 |
97.516 |
0.441 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
45.223 |
97.516 |
0.441 |
| pilA | Vibrio cholerae strain A1552 |
45.223 |
97.516 |
0.441 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
38.272 |
100 |
0.385 |
| comP | Acinetobacter baylyi ADP1 |
37.342 |
98.137 |
0.366 |
| pilE | Neisseria gonorrhoeae MS11 |
36.478 |
98.758 |
0.36 |