Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | AAFA28_RS02425 | Genome accession | NZ_CP151699 |
| Coordinates | 511711..512196 (+) | Length | 161 a.a. |
| NCBI ID | WP_220042346.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain F19-10-9 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 506711..517196
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAFA28_RS02405 (AAFA28_02405) | - | 508104..508991 (+) | 888 | WP_001017328.1 | metal-dependent hydrolase | - |
| AAFA28_RS02410 (AAFA28_02410) | - | 509121..509711 (+) | 591 | WP_000846931.1 | LemA family protein | - |
| AAFA28_RS02415 (AAFA28_02415) | - | 509733..510815 (+) | 1083 | WP_001246384.1 | TPM domain-containing protein | - |
| AAFA28_RS02420 (AAFA28_02420) | - | 510809..511369 (+) | 561 | WP_000258950.1 | TPM domain-containing protein | - |
| AAFA28_RS02425 (AAFA28_02425) | pilA | 511711..512196 (+) | 486 | WP_220042346.1 | pilin | Machinery gene |
| AAFA28_RS02430 (AAFA28_02430) | - | 512372..514000 (+) | 1629 | WP_002015646.1 | O-antigen ligase family protein | - |
| AAFA28_RS02435 (AAFA28_02435) | bfr | 514042..514506 (-) | 465 | WP_000678123.1 | bacterioferritin | - |
| AAFA28_RS02440 (AAFA28_02440) | - | 514752..514946 (-) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| AAFA28_RS02445 (AAFA28_02445) | - | 515156..515539 (-) | 384 | WP_000090000.1 | RidA family protein | - |
Sequence
Protein
Download Length: 161 a.a. Molecular weight: 16621.94 Da Isoelectric Point: 5.0937
>NTDB_id=980116 AAFA28_RS02425 WP_220042346.1 511711..512196(+) (pilA) [Acinetobacter baumannii strain F19-10-9]
MNAQKGFTLIELMIVVAIIGILAAIAIPQYQNYVGRSNVAAAVQTLTSNKSGLESYVMEFGEFPDGTTAPAAGDPTANPP
VAATRGERPQDLSIVNTTLGSIALGDKNNGAGIITLTFATGNPGIKGKKVQLARDANGTWTCVTDVDEKFAAKACPVGTP
Q
MNAQKGFTLIELMIVVAIIGILAAIAIPQYQNYVGRSNVAAAVQTLTSNKSGLESYVMEFGEFPDGTTAPAAGDPTANPP
VAATRGERPQDLSIVNTTLGSIALGDKNNGAGIITLTFATGNPGIKGKKVQLARDANGTWTCVTDVDEKFAAKACPVGTP
Q
Nucleotide
Download Length: 486 bp
>NTDB_id=980116 AAFA28_RS02425 WP_220042346.1 511711..512196(+) (pilA) [Acinetobacter baumannii strain F19-10-9]
ATGAATGCACAAAAAGGTTTTACGTTAATTGAACTCATGATCGTGGTTGCCATTATCGGTATCTTGGCAGCAATTGCGAT
TCCGCAATATCAAAATTATGTGGGTCGCTCTAATGTAGCAGCAGCTGTCCAAACACTTACATCAAATAAATCTGGTTTAG
AAAGTTATGTAATGGAATTTGGTGAATTCCCTGACGGTACTACGGCTCCAGCTGCAGGAGATCCAACAGCGAACCCACCA
GTAGCTGCTACTCGAGGTGAGCGACCACAGGATTTAAGTATTGTTAATACAACATTAGGAAGTATTGCTTTAGGTGATAA
AAACAATGGAGCTGGCATTATCACTTTAACATTTGCGACAGGCAATCCTGGTATTAAAGGCAAAAAGGTTCAGTTAGCTC
GTGATGCAAATGGAACTTGGACATGTGTAACTGATGTTGATGAGAAATTTGCAGCCAAAGCTTGTCCAGTAGGAACACCA
CAATAA
ATGAATGCACAAAAAGGTTTTACGTTAATTGAACTCATGATCGTGGTTGCCATTATCGGTATCTTGGCAGCAATTGCGAT
TCCGCAATATCAAAATTATGTGGGTCGCTCTAATGTAGCAGCAGCTGTCCAAACACTTACATCAAATAAATCTGGTTTAG
AAAGTTATGTAATGGAATTTGGTGAATTCCCTGACGGTACTACGGCTCCAGCTGCAGGAGATCCAACAGCGAACCCACCA
GTAGCTGCTACTCGAGGTGAGCGACCACAGGATTTAAGTATTGTTAATACAACATTAGGAAGTATTGCTTTAGGTGATAA
AAACAATGGAGCTGGCATTATCACTTTAACATTTGCGACAGGCAATCCTGGTATTAAAGGCAAAAAGGTTCAGTTAGCTC
GTGATGCAAATGGAACTTGGACATGTGTAACTGATGTTGATGAGAAATTTGCAGCCAAAGCTTGTCCAGTAGGAACACCA
CAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
48.75 |
99.379 |
0.484 |
| pilA | Pseudomonas aeruginosa PAK |
46.541 |
98.758 |
0.46 |
| pilA | Vibrio cholerae C6706 |
45.223 |
97.516 |
0.441 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
45.223 |
97.516 |
0.441 |
| pilA | Vibrio cholerae strain A1552 |
45.223 |
97.516 |
0.441 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
38.272 |
100 |
0.385 |
| comP | Acinetobacter baylyi ADP1 |
37.342 |
98.137 |
0.366 |
| pilE | Neisseria gonorrhoeae MS11 |
36.478 |
98.758 |
0.36 |