Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   MKX80_RS09410 Genome accession   NZ_CP150260
Coordinates   1852913..1854163 (+) Length   416 a.a.
NCBI ID   WP_234113025.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-0972     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1847913..1859163
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MKX80_RS09385 (MKX80_09385) - 1849227..1849958 (+) 732 WP_154997392.1 SDR family oxidoreductase -
  MKX80_RS09390 (MKX80_09390) - 1850029..1850286 (+) 258 WP_006638104.1 DUF3243 domain-containing protein -
  MKX80_RS09395 (MKX80_09395) - 1850534..1851325 (+) 792 WP_003181917.1 YmfK family protein -
  MKX80_RS09400 (MKX80_09400) - 1851343..1852245 (+) 903 WP_043926424.1 RodZ domain-containing protein -
  MKX80_RS09405 (MKX80_09405) pgsA 1852312..1852893 (+) 582 WP_043926425.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  MKX80_RS09410 (MKX80_09410) cinA 1852913..1854163 (+) 1251 WP_234113025.1 competence/damage-inducible protein A Machinery gene
  MKX80_RS09415 (MKX80_09415) recA 1854332..1855378 (+) 1047 WP_043926427.1 recombinase RecA Machinery gene
  MKX80_RS09420 (MKX80_09420) rny 1855720..1857279 (+) 1560 WP_075752751.1 ribonuclease Y -
  MKX80_RS09425 (MKX80_09425) - 1857366..1858163 (+) 798 WP_003181930.1 TIGR00282 family metallophosphoesterase -
  MKX80_RS09430 (MKX80_09430) spoVS 1858365..1858625 (+) 261 WP_003181955.1 stage V sporulation protein SpoVS -

Sequence

Protein


Download         Length: 416 a.a.        Molecular weight: 45613.91 Da        Isoelectric Point: 5.0686

>NTDB_id=968452 MKX80_RS09410 WP_234113025.1 1852913..1854163(+) (cinA) [Bacillus sp. FSL K6-0972]
MKLERKAEIIAVGSELLLGQIANTNAQFISRHLAEIGINVFYHTAVGDNPERLKQVIQTAQQRSDFIIFSGGLGPTKDDL
TKETIAEVVGRPLKLDDEAFESIQDYFKKTNREMSPNNRKQALILEGSDVLPNRFGMAPGMLLEHEARFYMLLPGPPKEL
EPMFENEAKPLILEKLGSREKIVSRVLRFFGIGESQLETDLEDLIDAQTNPTIAPLAADGEVTLRLTAKHADPAETNRLL
KETEDRILERVGEFFYGYDDTSLAEELAKACRSKGMTLAAAESFTGGLFSSWLTEMSGASEYFKGGAVCYTNELKVSAAG
VSEDTLQRYGAVSAQCAKELAAGIRVKTGSDIGISFTGVAGPNTQEGHPAGKVFIGISVKDQAEEAFEFQFAGSRSAVRK
RSAKYGCHLLLKMMEK

Nucleotide


Download         Length: 1251 bp        

>NTDB_id=968452 MKX80_RS09410 WP_234113025.1 1852913..1854163(+) (cinA) [Bacillus sp. FSL K6-0972]
ATGAAGTTGGAAAGAAAAGCGGAAATTATCGCTGTCGGTTCTGAGCTTCTGCTCGGACAAATCGCTAATACAAATGCTCA
GTTTATCAGCAGGCATTTGGCTGAAATCGGCATTAACGTCTTTTATCACACGGCGGTGGGAGACAATCCGGAACGCCTTA
AACAAGTTATTCAGACAGCACAGCAAAGGTCTGACTTCATCATTTTTTCAGGAGGCCTCGGACCGACGAAAGACGATTTG
ACAAAAGAAACGATCGCTGAAGTTGTCGGGCGCCCTCTTAAGCTTGACGATGAAGCCTTCGAATCGATTCAGGACTACTT
CAAAAAAACGAACCGGGAGATGTCGCCGAACAACCGCAAACAGGCGCTGATCCTAGAAGGCTCCGACGTTCTGCCGAACC
GCTTCGGGATGGCTCCGGGAATGCTGCTTGAGCATGAAGCGCGCTTTTATATGCTTCTGCCGGGACCTCCGAAAGAGCTG
GAGCCGATGTTTGAAAACGAAGCGAAGCCGCTCATTTTGGAAAAGCTCGGTTCGAGGGAAAAGATCGTGTCAAGGGTGCT
GCGGTTCTTCGGCATCGGGGAATCCCAGCTTGAAACCGATTTGGAAGATCTCATTGATGCGCAGACTAATCCGACAATCG
CCCCGCTTGCGGCAGACGGGGAAGTCACGCTCAGGCTCACGGCAAAGCATGCGGATCCGGCGGAGACAAACCGCTTGTTA
AAAGAAACGGAAGACCGCATCCTGGAGCGGGTCGGAGAGTTCTTTTACGGGTATGATGATACATCCCTCGCAGAAGAGCT
TGCGAAAGCATGCAGGAGCAAGGGAATGACCCTGGCTGCTGCGGAAAGCTTTACAGGCGGGCTTTTTTCCAGCTGGCTGA
CGGAAATGAGCGGCGCTTCCGAATACTTCAAAGGCGGCGCCGTCTGCTACACTAACGAATTGAAAGTGTCAGCGGCCGGC
GTTTCGGAAGACACGCTGCAGCGCTACGGTGCGGTCAGCGCGCAATGCGCAAAAGAACTCGCCGCAGGCATCAGAGTCAA
AACAGGAAGCGATATCGGCATCAGCTTCACTGGAGTAGCCGGGCCGAATACGCAAGAAGGCCATCCGGCAGGAAAGGTGT
TTATCGGCATCTCCGTGAAGGACCAGGCTGAAGAAGCGTTCGAATTTCAGTTCGCCGGATCCAGATCTGCGGTGCGGAAA
CGTTCTGCCAAATACGGCTGCCATCTGTTGCTGAAAATGATGGAAAAATAA

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(261-414)

Probable molybdopterin binding domain (MoCF_biosynth)

(9-172)

Damage-inducible protein CinA KH domain (CinA_KH)

(184-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

76.442

100

0.764
  cinA Streptococcus pneumoniae TIGR4

47.255

100

0.476
  cinA Streptococcus mitis SK321

46.778

100

0.471
  cinA Streptococcus pneumoniae R6

46.778

100

0.471
  cinA Streptococcus pneumoniae Rx1

46.778

100

0.471
  cinA Streptococcus mitis NCTC 12261

46.778

100

0.471
  cinA Streptococcus pneumoniae D39

46.539

100

0.469
  cinA Streptococcus mutans UA159

46.585

98.558

0.459
  cinA Streptococcus suis isolate S10

41.162

95.192

0.392

Multiple sequence alignment