Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   ACJEHX_RS10005 Genome accession   NZ_CP174220
Coordinates   2243939..2246011 (+) Length   690 a.a.
NCBI ID   WP_010947749.1    Uniprot ID   Q5ZTX5
Organism   Legionella pneumophila strain SPF647     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2238939..2251011
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJEHX_RS09985 (ACJEHX_09985) folB 2239788..2240126 (+) 339 WP_010947745.1 dihydroneopterin aldolase -
  ACJEHX_RS09990 (ACJEHX_09990) - 2240166..2240861 (-) 696 WP_011215990.1 SPOR domain-containing protein -
  ACJEHX_RS09995 (ACJEHX_09995) argS 2240861..2242630 (-) 1770 WP_010947747.1 arginine--tRNA ligase -
  ACJEHX_RS10000 (ACJEHX_10000) - 2242734..2243792 (-) 1059 WP_011214278.1 AI-2E family transporter -
  ACJEHX_RS10005 (ACJEHX_10005) recG 2243939..2246011 (+) 2073 WP_010947749.1 ATP-dependent DNA helicase RecG Machinery gene
  ACJEHX_RS10010 (ACJEHX_10010) - 2246525..2247667 (+) 1143 WP_015444330.1 cation diffusion facilitator family transporter -
  ACJEHX_RS10015 (ACJEHX_10015) - 2247783..2248541 (+) 759 WP_010947751.1 ZIP family metal transporter -
  ACJEHX_RS10020 (ACJEHX_10020) - 2248534..2249136 (+) 603 WP_010947752.1 nucleoside triphosphate pyrophosphatase -
  ACJEHX_RS10025 (ACJEHX_10025) eno 2249168..2250436 (+) 1269 WP_010947753.1 phosphopyruvate hydratase -
  ACJEHX_RS10030 (ACJEHX_10030) ftsB 2250661..2250930 (+) 270 WP_010947754.1 cell division protein FtsB -

Sequence

Protein


Download         Length: 690 a.a.        Molecular weight: 78154.36 Da        Isoelectric Point: 8.3111

>NTDB_id=962853 ACJEHX_RS10005 WP_010947749.1 2243939..2246011(+) (recG) [Legionella pneumophila strain SPF647]
MLSNSCEYLTGVGPTIAAKLAKCGIFTIQDLLFHLPYKYQDRTRITPIQDLRSNEWCVIAGHVYKTEIKYGKRMMLNCYV
EDKTGVVKLRFFHFNKQQIQALNNSTMIRAFGEVRGFNNHLEMIHPEYQLIDQESDFHVEETLTPIYPSTQGLTQTRLRQ
LVKIALEQSEHELHQLEWMSEKQLQENNFYDLGEAIKLLHNPPPDISLSNLEAGEHPALKRLIFDELLAQQLSMQFARQS
RSKLQAPAILFDNAIHKRFIESLPFSLTNAQQRVFKEISFDLTQSKPMLRLLQGDVGAGKTIIAALAALQAISQGFQVAF
MAPTDLLSEQHTNSLSKWLEPIGINVLRLSGKMKTTERKNALAALQDNSCQLIVGTHALFQEQVEFARLGLVIIDEQHRF
GVEQRLLLQQKGQLNQLIPHQLLMTATPIPRTLSMSHFAHLDISVIDELPPGRMPITTAVLNQDKRELIIERLQAAIANG
KQAYWVCTLIEESEKLQCMAATDTSKKLQEQLSFARVGLVHGRMKALEKEATMAAFKQGEIDLLVATTVIEVGVDVPNAS
LMIIENAERLGLSQLHQLRGRVGRGNNQSHCLLLYQSPLSQQGAERLKIMRSTTDGFLISEKDLELRGSGEILGTRQTGF
RQFKIANLQRDKTLFAILRPIAKQLVLEKTAIARQITQRWLGNFEQFLQS

Nucleotide


Download         Length: 2073 bp        

>NTDB_id=962853 ACJEHX_RS10005 WP_010947749.1 2243939..2246011(+) (recG) [Legionella pneumophila strain SPF647]
GTGCTGAGTAACTCTTGTGAATATTTAACTGGCGTCGGCCCAACCATTGCAGCAAAACTTGCTAAATGTGGGATTTTCAC
GATACAAGACTTGCTTTTCCACCTGCCTTATAAATACCAGGACAGAACCAGGATAACACCAATTCAGGATTTGCGCTCGA
ATGAATGGTGCGTTATCGCGGGGCATGTATACAAAACTGAAATAAAATACGGCAAAAGGATGATGTTGAATTGTTATGTG
GAAGATAAAACAGGAGTAGTGAAGCTTCGTTTTTTTCATTTCAACAAGCAGCAAATCCAGGCTTTGAATAATAGCACCAT
GATTCGAGCTTTTGGCGAAGTCCGCGGATTTAACAACCACTTGGAGATGATTCATCCAGAATATCAATTAATTGATCAAG
AATCAGATTTCCACGTGGAAGAAACTCTTACGCCAATTTATCCATCGACTCAAGGCTTGACTCAAACCCGATTAAGGCAG
TTAGTTAAAATAGCCCTGGAACAATCTGAACACGAACTTCATCAATTGGAATGGATGAGTGAAAAACAATTACAGGAAAA
CAATTTTTATGATTTGGGCGAAGCCATTAAATTACTACATAACCCTCCGCCAGATATCTCCCTCTCCAACCTCGAAGCTG
GCGAACATCCTGCTCTCAAGCGATTAATATTTGATGAATTACTGGCACAACAGCTCAGTATGCAATTTGCAAGGCAGTCA
CGCAGCAAGCTCCAGGCTCCCGCTATACTTTTCGATAATGCAATTCATAAACGTTTTATCGAATCATTGCCATTCAGTCT
TACAAACGCACAACAACGGGTTTTTAAAGAAATCAGCTTTGATTTAACTCAAAGCAAACCCATGCTTCGTTTGCTGCAAG
GAGATGTTGGGGCGGGTAAAACCATTATCGCGGCACTAGCCGCCCTTCAAGCCATTTCACAAGGATTTCAGGTTGCTTTT
ATGGCACCAACCGATTTATTAAGTGAACAACATACAAATAGCCTTAGTAAATGGTTAGAACCTATCGGTATTAATGTATT
AAGACTGAGCGGTAAAATGAAAACCACAGAACGAAAAAATGCGCTTGCAGCCCTGCAGGACAATAGCTGTCAGCTCATTG
TTGGAACTCATGCCTTATTTCAGGAGCAAGTCGAATTCGCTCGTTTGGGTTTGGTCATTATTGACGAACAACACCGATTT
GGAGTAGAACAACGGCTCCTTCTGCAACAAAAAGGGCAATTAAACCAATTAATCCCTCATCAATTATTAATGACAGCCAC
CCCTATTCCAAGAACCCTGTCAATGTCCCATTTTGCCCATTTGGATATATCGGTCATCGATGAACTACCGCCTGGCCGTA
TGCCAATTACAACAGCAGTATTAAACCAGGATAAGCGTGAACTCATTATCGAACGTTTGCAAGCGGCAATCGCCAACGGC
AAACAAGCTTACTGGGTCTGTACCCTTATAGAAGAATCTGAAAAATTACAATGCATGGCAGCAACAGATACCTCAAAAAA
ACTACAAGAACAGCTCTCTTTCGCGCGTGTTGGTCTTGTTCATGGGAGAATGAAAGCACTTGAAAAAGAAGCTACTATGG
CAGCCTTTAAACAAGGCGAGATTGATTTATTGGTGGCAACTACTGTTATTGAAGTTGGTGTAGATGTTCCTAATGCCAGT
TTAATGATCATTGAAAATGCAGAGCGACTTGGTTTGTCGCAGTTACATCAATTACGAGGGCGCGTGGGCAGAGGTAATAA
TCAATCTCATTGTCTATTACTTTATCAATCTCCTCTATCACAACAAGGTGCTGAACGTCTCAAGATCATGCGTTCAACAA
CAGACGGTTTTCTAATCTCCGAAAAGGATCTGGAGTTAAGAGGCTCAGGAGAAATATTAGGAACCAGACAGACTGGCTTT
AGACAATTTAAAATAGCTAACTTACAACGCGATAAAACCCTCTTCGCTATTTTACGTCCAATTGCAAAACAACTGGTGCT
GGAAAAAACAGCAATCGCCAGACAAATTACACAACGATGGCTGGGCAATTTTGAACAATTTTTGCAAAGTTAA

Domains

Predicted by InterProScan.

RecG wedge domain (RecG_wedge)

(7-164)

DEAD/DEAH box helicase (DEAD)

(270-431)

Helicase conserved C-terminal domain (Helicase_C)

(469-586)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(613-668)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5ZTX5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

47.923

97.681

0.468
  recG Bacillus subtilis subsp. subtilis str. 168

38.905

97.971

0.381
  recG/mmsA Streptococcus pneumoniae R6

38.681

96.667

0.374
  recG/mmsA Streptococcus pneumoniae R36A

38.681

96.667

0.374