Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | WE862_RS07870 | Genome accession | NZ_CP149571 |
| Coordinates | 1621627..1621947 (-) | Length | 106 a.a. |
| NCBI ID | WP_042031805.1 | Uniprot ID | - |
| Organism | Aeromonas jandaei strain DSM 7311 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1616627..1626947
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WE862_RS07850 (WE862_07850) | - | 1617020..1617709 (-) | 690 | WP_042031807.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| WE862_RS07855 (WE862_07855) | - | 1617949..1618920 (+) | 972 | WP_041210394.1 | response regulator | - |
| WE862_RS07860 (WE862_07860) | - | 1619009..1620406 (-) | 1398 | WP_042031806.1 | peptide MFS transporter | - |
| WE862_RS07865 (WE862_07865) | galU | 1620620..1621531 (-) | 912 | WP_033114924.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| WE862_RS07870 (WE862_07870) | comEA/comE1 | 1621627..1621947 (-) | 321 | WP_042031805.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| WE862_RS07875 (WE862_07875) | pta | 1622286..1624467 (-) | 2182 | Protein_1484 | phosphate acetyltransferase | - |
| WE862_RS07880 (WE862_07880) | - | 1624523..1625725 (-) | 1203 | WP_040065015.1 | acetate kinase | - |
| WE862_RS07885 (WE862_07885) | yfbV | 1626030..1626470 (+) | 441 | WP_042031801.1 | terminus macrodomain insulation protein YfbV | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11349.30 Da Isoelectric Point: 10.0127
>NTDB_id=959896 WE862_RS07870 WP_042031805.1 1621627..1621947(-) (comEA/comE1) [Aeromonas jandaei strain DSM 7311]
MRKNSLSIIMLLSALPLFTLPSLAADKVAPKQATTVAAKQEIGKVDINTATLAELTNLKGIGDKKAQAIVDYREKQGKFT
SVDQLVDVNGIGPATLEANRDMIIVK
MRKNSLSIIMLLSALPLFTLPSLAADKVAPKQATTVAAKQEIGKVDINTATLAELTNLKGIGDKKAQAIVDYREKQGKFT
SVDQLVDVNGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=959896 WE862_RS07870 WP_042031805.1 1621627..1621947(-) (comEA/comE1) [Aeromonas jandaei strain DSM 7311]
ATGCGTAAAAACAGCTTGTCCATCATCATGTTGTTGTCCGCCCTCCCGTTGTTCACCCTGCCCTCACTGGCCGCAGACAA
GGTCGCACCGAAGCAGGCCACCACGGTTGCCGCCAAGCAGGAGATCGGCAAAGTGGATATCAATACGGCAACCCTTGCCG
AGCTCACCAACCTCAAGGGGATTGGCGACAAAAAGGCACAAGCCATCGTCGACTATCGCGAAAAACAGGGAAAATTTACC
TCGGTTGATCAACTGGTTGATGTAAACGGCATCGGCCCGGCCACGCTGGAAGCCAACCGTGACATGATCATCGTCAAATA
A
ATGCGTAAAAACAGCTTGTCCATCATCATGTTGTTGTCCGCCCTCCCGTTGTTCACCCTGCCCTCACTGGCCGCAGACAA
GGTCGCACCGAAGCAGGCCACCACGGTTGCCGCCAAGCAGGAGATCGGCAAAGTGGATATCAATACGGCAACCCTTGCCG
AGCTCACCAACCTCAAGGGGATTGGCGACAAAAAGGCACAAGCCATCGTCGACTATCGCGAAAAACAGGGAAAATTTACC
TCGGTTGATCAACTGGTTGATGTAAACGGCATCGGCCCGGCCACGCTGGAAGCCAACCGTGACATGATCATCGTCAAATA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
47.826 |
100 |
0.519 |
| comEA | Vibrio cholerae C6706 |
51.456 |
97.17 |
0.5 |
| comEA | Vibrio cholerae strain A1552 |
51.456 |
97.17 |
0.5 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
46.392 |
91.509 |
0.425 |
| comEA/celA/cilE | Streptococcus pneumoniae Rx1 |
39.423 |
98.113 |
0.387 |
| comEA/celA/cilE | Streptococcus pneumoniae D39 |
39.423 |
98.113 |
0.387 |
| comEA/celA/cilE | Streptococcus pneumoniae R6 |
39.423 |
98.113 |
0.387 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
38.095 |
99.057 |
0.377 |
| comEA/celA/cilE | Streptococcus pneumoniae TIGR4 |
38.235 |
96.226 |
0.368 |