Detailed information NTG0938719

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: LBA42_RS08055
• Genome accession: NZ_CP145437
• Coordinates: 1595871..1596305 (+)
• Length: 144 a.a.
• NCBI ID: WP_033606693.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain HAC 39-1996
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1590871..1601305

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LBA42_RS08030 (LBA42_08030)	-	1592028..1593086 (+)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-
LBA42_RS08035 (LBA42_08035)	-	1593237..1593602 (+)	366	WP_000286415.1	DUF1033 family protein	-
LBA42_RS08040 (LBA42_08040)	comGA/cglA/cilD	1593678..1594619 (+)	942	WP_000249536.1	competence type IV pilus ATPase ComGA	Machinery gene
LBA42_RS08045 (LBA42_08045)	comGB/cglB	1594567..1595583 (+)	1017	WP_078130737.1	competence type IV pilus assembly protein ComGB	Machinery gene
LBA42_RS08050 (LBA42_08050)	comGC/cglC	1595585..1595908 (+)	324	WP_000738628.1	comG operon protein ComGC	Machinery gene
LBA42_RS08055 (LBA42_08055)	comGD/cglD	1595871..1596305 (+)	435	WP_033606693.1	competence type IV pilus minor pilin ComGD	Machinery gene
LBA42_RS08060 (LBA42_08060)	comGE/cglE	1596268..1596570 (+)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
LBA42_RS08065 (LBA42_08065)	comGF/cglF	1596533..1596994 (+)	462	WP_000250531.1	competence type IV pilus minor pilin ComGF	Machinery gene
LBA42_RS08070 (LBA42_08070)	comGG/cglG	1596972..1597418 (+)	447	WP_001809944.1	competence type IV pilus minor pilin ComGG	Machinery gene
LBA42_RS08075 (LBA42_08075)	-	1597521..1598113 (+)	593	Protein_1580	methyltransferase domain-containing protein	-
LBA42_RS08080 (LBA42_08080)	comYH	1598174..1599127 (+)	954	WP_000345126.1	class I SAM-dependent methyltransferase	Machinery gene
LBA42_RS08085 (LBA42_08085)	-	1599178..1600368 (+)	1191	WP_000167765.1	acetate kinase	-
LBA42_RS08090 (LBA42_08090)	-	1600369..1600500 (+)	132	WP_000768904.1	hypothetical protein	-
LBA42_RS08095 (LBA42_08095)	rnpA	1600517..1600888 (+)	372	WP_000739246.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15802.39 Da
• Isoelectric Point: 10.5150

>NTDB_id=938719 LBA42_RS08055 WP_033606693.1 1595871..1596305(+) (comGD/cglD) [Streptococcus pneumoniae strain HAC 39-1996]
MINKILVKSLKIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQM
ISNGSQKLPVPKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 435 bp

>NTDB_id=938719 LBA42_RS08055 WP_033606693.1 1595871..1596305(+) (comGD/cglD) [Streptococcus pneumoniae strain HAC 39-1996]
ATGATAAACAAAATACTAGTCAAATCGTTAAAGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGT
GAGTATCCTTGCCTTGGGCTTGTCCGGCTCTGTCCAGTCCACTTTTGCAGCGGTAGAGGAACAGATTTTCTTTATGGAGT
TTGAAGAACTCTATCGGGAAACCCAAAAACGCAGTGTAGCTAGTCAACAAAAGACTAGTCTGAACTTGGATGGGCAGATG
ATTAGCAATGGCAGTCAAAAGTTGCCAGTCCCTAAAGGAATTCAGGCCCCATCAGGCCAAAGTATTACATTTGACCGTGC
TGGGGGCAATTCGTCCCTGGCTAAGGTTGAATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATG
GAAAAATTAAACGCATTAAGGAAACAAAAAATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	94.444	100	0.944
comGD/cglD	Streptococcus pneumoniae Rx1	98.496	92.361	0.91
comGD/cglD	Streptococcus pneumoniae D39	98.496	92.361	0.91
comGD/cglD	Streptococcus pneumoniae R6	98.496	92.361	0.91
comGD/cglD	Streptococcus pneumoniae TIGR4	97.744	92.361	0.903
comGD/cglD	Streptococcus mitis SK321	96.241	92.361	0.889
comYD	Streptococcus gordonii str. Challis substr. CH1	56.835	96.528	0.549
comYD	Streptococcus mutans UA140	49.612	89.583	0.444
comYD	Streptococcus mutans UA159	49.612	89.583	0.444