Detailed information
Bioinformatically predicted
Overview
| Name | comGC/cglC | Type | Machinery gene |
| Locus tag | ENLAB_RS07005 | Genome accession | NZ_AP025635 |
| Coordinates | 1527944..1528174 (-) | Length | 76 a.a. |
| NCBI ID | WP_244353212.1 | Uniprot ID | - |
| Organism | Enterococcus innesii strain DB-1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1522944..1533174
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ENLAB_RS06975 (ENLAB_14100) | - | 1524071..1525255 (-) | 1185 | WP_005233419.1 | acetate/propionate family kinase | - |
| ENLAB_RS06980 (ENLAB_14110) | - | 1525280..1526284 (-) | 1005 | WP_081117827.1 | class I SAM-dependent methyltransferase | - |
| ENLAB_RS06985 (ENLAB_14120) | comGG | 1526461..1526772 (-) | 312 | WP_244353210.1 | competence type IV pilus minor pilin ComGG | - |
| ENLAB_RS06990 (ENLAB_14130) | comGF | 1526786..1527211 (-) | 426 | WP_077452346.1 | competence type IV pilus minor pilin ComGF | - |
| ENLAB_RS06995 (ENLAB_14140) | - | 1527201..1527515 (-) | 315 | WP_077452347.1 | hypothetical protein | - |
| ENLAB_RS07000 (ENLAB_14150) | comGD | 1527496..1527969 (-) | 474 | WP_244353211.1 | competence type IV pilus minor pilin ComGD | - |
| ENLAB_RS07005 (ENLAB_14160) | comGC/cglC | 1527944..1528174 (-) | 231 | WP_244353212.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ENLAB_RS07010 (ENLAB_14170) | - | 1528263..1528880 (+) | 618 | WP_213357303.1 | DUF4352 domain-containing protein | - |
| ENLAB_RS07015 (ENLAB_14180) | - | 1529033..1529323 (+) | 291 | WP_142434609.1 | DUF5960 family protein | - |
| ENLAB_RS07020 (ENLAB_14200) | - | 1529512..1529781 (+) | 270 | WP_244353213.1 | hypothetical protein | - |
| ENLAB_RS07025 (ENLAB_14210) | - | 1529904..1530317 (+) | 414 | WP_118215254.1 | hypothetical protein | - |
| ENLAB_RS07030 (ENLAB_14220) | - | 1530327..1530875 (+) | 549 | WP_118215255.1 | hypothetical protein | - |
| ENLAB_RS07035 (ENLAB_14230) | - | 1530856..1531152 (+) | 297 | WP_118215256.1 | hypothetical protein | - |
| ENLAB_RS07040 (ENLAB_14240) | - | 1531656..1532438 (-) | 783 | WP_244353214.1 | N-acetylmuramoyl-L-alanine amidase | - |
| ENLAB_RS07045 (ENLAB_14250) | - | 1532441..1532692 (-) | 252 | WP_244353216.1 | DUF5960 family protein | - |
| ENLAB_RS07050 (ENLAB_14260) | - | 1532732..1533001 (-) | 270 | WP_244353218.1 | phage holin family protein | - |
Sequence
Protein
Download Length: 76 a.a. Molecular weight: 8588.90 Da Isoelectric Point: 4.1173
>NTDB_id=93344 ENLAB_RS07005 WP_244353212.1 1527944..1528174(-) (comGC/cglC) [Enterococcus innesii strain DB-1]
MLVVLLVISILVLLFVPNLASQRGIIDEKGNAAIVKVVETQIELFRLNENREPSREELIAEGYVSEEQYAIYEQGN
MLVVLLVISILVLLFVPNLASQRGIIDEKGNAAIVKVVETQIELFRLNENREPSREELIAEGYVSEEQYAIYEQGN
Nucleotide
Download Length: 231 bp
>NTDB_id=93344 ENLAB_RS07005 WP_244353212.1 1527944..1528174(-) (comGC/cglC) [Enterococcus innesii strain DB-1]
ATGCTAGTCGTTTTATTAGTGATCAGTATTTTGGTTTTATTGTTTGTCCCAAATCTTGCCAGTCAAAGAGGAATCATTGA
TGAGAAAGGAAATGCGGCCATCGTGAAAGTAGTGGAAACACAGATCGAACTCTTCCGTCTGAATGAAAATCGGGAGCCTT
CGAGAGAAGAATTGATTGCTGAAGGGTATGTATCTGAGGAACAATATGCGATTTATGAGCAGGGGAACTGA
ATGCTAGTCGTTTTATTAGTGATCAGTATTTTGGTTTTATTGTTTGTCCCAAATCTTGCCAGTCAAAGAGGAATCATTGA
TGAGAAAGGAAATGCGGCCATCGTGAAAGTAGTGGAAACACAGATCGAACTCTTCCGTCTGAATGAAAATCGGGAGCCTT
CGAGAGAAGAATTGATTGCTGAAGGGTATGTATCTGAGGAACAATATGCGATTTATGAGCAGGGGAACTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
52.632 |
100 |
0.526 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
52.703 |
97.368 |
0.513 |
| comGC/cglC | Streptococcus pneumoniae D39 |
52.703 |
97.368 |
0.513 |
| comGC/cglC | Streptococcus pneumoniae R6 |
52.703 |
97.368 |
0.513 |
| comYC | Streptococcus suis isolate S10 |
52.778 |
94.737 |
0.5 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
50 |
97.368 |
0.487 |
| comGC | Staphylococcus aureus MW2 |
49.275 |
90.789 |
0.447 |
| comGC | Staphylococcus aureus N315 |
49.275 |
90.789 |
0.447 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
47.541 |
80.263 |
0.382 |
| comGC/cglC | Streptococcus mitis SK321 |
47.541 |
80.263 |
0.382 |