Detailed information NTG0925227

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: AB5J56_RS43290
• Genome accession: NZ_CP163435
• Coordinates: 9666973..9667626 (-)
• Length: 217 a.a.
• NCBI ID: WP_369241710.1
• Uniprot ID: -
• Organism: Streptomyces sp. R21
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 9661973..9672626

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB5J56_RS43265 (AB5J56_43260)	-	9662510..9663874 (+)	1365	WP_369241700.1	DUF6777 domain-containing protein	-
AB5J56_RS43270 (AB5J56_43265)	-	9664096..9664605 (+)	510	WP_369241702.1	hypothetical protein	-
AB5J56_RS43275 (AB5J56_43270)	-	9665015..9665722 (+)	708	WP_369241704.1	carbon-nitrogen hydrolase family protein	-
AB5J56_RS43280 (AB5J56_43275)	-	9665870..9666322 (+)	453	WP_369241706.1	helix-turn-helix domain-containing protein	-
AB5J56_RS43285 (AB5J56_43280)	clpP	9666369..9666971 (-)	603	WP_369241708.1	ClpP family protease	Regulator
AB5J56_RS43290 (AB5J56_43285)	clpP	9666973..9667626 (-)	654	WP_369241710.1	ATP-dependent Clp protease proteolytic subunit	Regulator
AB5J56_RS43295 (AB5J56_43290)	-	9667771..9668970 (-)	1200	WP_369241712.1	epoxide hydrolase family protein	-
AB5J56_RS43300 (AB5J56_43295)	-	9669195..9670010 (+)	816	WP_369241714.1	alpha/beta fold hydrolase	-
AB5J56_RS43305 (AB5J56_43300)	-	9670084..9670566 (+)	483	WP_369241716.1	VOC family protein	-
AB5J56_RS43310 (AB5J56_43305)	-	9670759..9671763 (-)	1005	WP_369241718.1	nitroreductase family protein	-

Sequence

Protein

• Length: 217 a.a.
• Molecular weight: 23649.63 Da
• Isoelectric Point: 4.7009

>NTDB_id=925227 AB5J56_RS43290 WP_369241710.1 9666973..9667626(-) (clpP) [Streptomyces sp. R21]
MTPFITGWDPGRAPRAEEGDTPATRFDDHLAAQLLAQRIVLLGTQVDEVSANRVCAQLLLLSAEDSRTDISLYINSPGGS
VTAGLAIYDTMRLIPNDVSTLVMGFAASMGQFLLSVGTHGKRFALPNARIMMHQPSAGIGGSTADIEIQAENLEFTKKAI
ERITAEHTGQSEETISQDGDRDRWFTAEQAREYGMVDRVVESLDDVRPAASRRRMGL

Nucleotide

• Length: 654 bp

>NTDB_id=925227 AB5J56_RS43290 WP_369241710.1 9666973..9667626(-) (clpP) [Streptomyces sp. R21]
ATGACTCCATTCATCACCGGCTGGGACCCGGGCCGCGCTCCGCGGGCCGAAGAGGGCGACACCCCGGCAACACGATTCGA
CGACCATCTGGCCGCGCAACTGCTCGCGCAGCGGATCGTCCTGCTCGGCACCCAGGTCGACGAGGTCTCCGCCAACCGGG
TCTGCGCCCAGCTGCTCCTGCTGTCGGCGGAGGACTCGCGTACGGACATCAGCCTGTACATCAACAGTCCTGGCGGATCG
GTGACCGCGGGGCTCGCGATCTACGACACGATGCGGCTGATCCCCAACGACGTCTCGACGCTCGTGATGGGGTTCGCGGC
GAGCATGGGCCAGTTCCTGCTGAGCGTGGGAACGCACGGCAAGCGCTTCGCACTGCCGAACGCGCGGATCATGATGCACC
AGCCGTCGGCCGGGATCGGCGGGAGCACCGCCGACATCGAAATCCAGGCGGAGAACCTGGAGTTCACCAAGAAGGCCATC
GAGCGGATCACCGCGGAGCACACCGGCCAGAGCGAGGAGACGATCTCCCAGGACGGCGATCGCGACCGCTGGTTCACGGC
CGAACAGGCCAGGGAGTACGGCATGGTGGACCGGGTCGTGGAGTCGCTCGACGATGTCCGCCCGGCCGCGTCACGACGAC
GGATGGGACTCTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (30-201)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	48.315	82.028	0.396
clpP	Streptococcus pneumoniae TIGR4	49.711	79.724	0.396
clpP	Streptococcus pneumoniae Rx1	49.711	79.724	0.396
clpP	Streptococcus pneumoniae D39	49.711	79.724	0.396
clpP	Streptococcus pneumoniae R6	49.711	79.724	0.396
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	49.133	79.724	0.392
clpP	Lactococcus lactis subsp. cremoris KW2	48.571	80.645	0.392
clpP	Streptococcus pyogenes MGAS315	48	80.645	0.387
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	48	80.645	0.387
clpP	Streptococcus pyogenes JRS4	48	80.645	0.387
clpP	Streptococcus thermophilus LMD-9	47.399	79.724	0.378
clpP	Streptococcus thermophilus LMG 18311	47.399	79.724	0.378
clpP	Streptococcus mutans UA159	46.857	80.645	0.378