Detailed information NTG0919051

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: VNN51_RS09130
• Genome accession: NZ_CP141727
• Coordinates: 1818023..1818874 (-)
• Length: 283 a.a.
• NCBI ID: WP_253008974.1
• Uniprot ID: -
• Organism: Lactococcus formosensis strain M20011502 FF20a2
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1813023..1823874

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VNN51_RS09115 (VNN51_09115)	-	1813982..1814203 (+)	222	WP_252175013.1	hypothetical protein	-
VNN51_RS09120 (VNN51_09120)	trmFO	1814277..1815620 (-)	1344	WP_017370389.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
VNN51_RS09125 (VNN51_09125)	topA	1815666..1817816 (-)	2151	WP_165711717.1	type I DNA topoisomerase	-
VNN51_RS09130 (VNN51_09130)	dprA	1818023..1818874 (-)	852	WP_253008974.1	DNA-processing protein DprA	Machinery gene
VNN51_RS09135 (VNN51_09135)	budA	1818963..1819661 (-)	699	WP_253008973.1	acetolactate decarboxylase	-
VNN51_RS09140 (VNN51_09140)	-	1819804..1821528 (-)	1725	WP_017370392.1	ABC transporter permease/substrate binding protein	-
VNN51_RS09145 (VNN51_09145)	-	1821521..1822723 (-)	1203	WP_017370393.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
VNN51_RS09150 (VNN51_09150)	-	1822928..1823548 (-)	621	WP_019291676.1	GntR family transcriptional regulator	-

Sequence

Protein

• Length: 283 a.a.
• Molecular weight: 32092.30 Da
• Isoelectric Point: 10.0219

>NTDB_id=919051 VNN51_RS09130 WP_253008974.1 1818023..1818874(-) (dprA) [Lactococcus formosensis strain M20011502 FF20a2]
MIKNFEILRLKKAGMSNLGILKLINYQERHEVKLTLRQFARIAEIKAIPNFIENYKSQDVKRLRKLYKLFPSFSILDDIY
PEWLKEIHNPPALLFYQGNLKLLNLPKLGFVGSRESSKEAIKITHKLIEELKQNFVIVSGLARGVDTSSHVAAVKQKTPT
IAVIGNGLDISYPKENRKLQEYLATHELVLSEYLAGEQPLKFHFPERNRIIAGLSRGIVVIEAKQRSGSLITSRYALEGN
REVFAVPGDILNRNASGCNQLIQQGAAKLVTHGQDILDEFYLD

Nucleotide

• Length: 852 bp

>NTDB_id=919051 VNN51_RS09130 WP_253008974.1 1818023..1818874(-) (dprA) [Lactococcus formosensis strain M20011502 FF20a2]
ATGATTAAAAACTTTGAAATATTACGTTTGAAAAAAGCAGGAATGTCAAATCTTGGAATTTTGAAACTGATCAACTATCA
GGAAAGGCATGAAGTAAAGCTTACTTTACGACAATTTGCACGGATTGCAGAGATTAAAGCTATCCCAAATTTTATTGAGA
ATTATAAGAGTCAGGATGTTAAACGGCTACGAAAGCTATATAAGCTCTTCCCTTCGTTCTCCATTTTAGATGATATTTAT
CCAGAATGGTTAAAAGAAATACATAATCCTCCGGCACTCCTTTTTTACCAAGGAAATCTAAAATTACTTAATCTACCTAA
ACTTGGATTTGTAGGTAGCCGTGAAAGCTCCAAAGAAGCAATCAAAATTACGCATAAGCTTATTGAGGAATTAAAACAAA
ACTTTGTTATTGTGAGCGGATTGGCACGCGGTGTTGACACTTCTAGCCATGTAGCAGCTGTAAAGCAAAAAACTCCAACT
ATTGCTGTCATAGGTAATGGTTTAGATATTTCTTATCCAAAAGAAAATCGTAAATTACAAGAATATTTAGCAACACACGA
ATTAGTTTTATCAGAGTACCTTGCAGGAGAGCAACCGCTCAAGTTTCATTTCCCAGAGAGGAATAGAATCATTGCTGGTC
TTTCACGTGGAATTGTCGTTATTGAAGCAAAACAACGTAGTGGAAGTCTCATTACAAGTCGATATGCATTAGAAGGGAAT
AGAGAGGTATTCGCTGTACCTGGAGATATTTTGAATCGAAATGCCTCAGGCTGTAATCAATTAATTCAACAGGGAGCTGC
TAAGCTTGTCACACACGGTCAAGATATTTTAGATGAATTTTATTTAGATTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (75-271)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	63.571	98.94	0.629
dprA	Streptococcus mutans UA159	56.272	98.587	0.555
dprA/cilB/dalA	Streptococcus pneumoniae D39	54.839	98.587	0.541
dprA/cilB/dalA	Streptococcus pneumoniae R6	54.839	98.587	0.541
dprA/cilB/dalA	Streptococcus mitis SK321	54.839	98.587	0.541
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	54.839	98.587	0.541
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	54.839	98.587	0.541
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	54.122	98.587	0.534
dprA	Haemophilus influenzae Rd KW20	39.416	96.82	0.382
dprA	Latilactobacillus sakei subsp. sakei 23K	36.806	100	0.375
dprA	Staphylococcus aureus N315	38.931	92.58	0.36