Detailed information NTG0918919

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: VNN48_RS01640
• Genome accession: NZ_CP141723
• Coordinates: 347672..348523 (+)
• Length: 283 a.a.
• NCBI ID: WP_213432921.1
• Uniprot ID: -
• Organism: Lactococcus formosensis strain PAQ-208
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 342672..353523

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VNN48_RS01620 (VNN48_01620)	-	342998..343618 (+)	621	WP_017370394.1	GntR family transcriptional regulator	-
VNN48_RS01625 (VNN48_01625)	-	343823..345025 (+)	1203	WP_017370393.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
VNN48_RS01630 (VNN48_01630)	-	345018..346742 (+)	1725	WP_017370392.1	ABC transporter permease/substrate binding protein	-
VNN48_RS01635 (VNN48_01635)	budA	346885..347583 (+)	699	WP_253008973.1	acetolactate decarboxylase	-
VNN48_RS01640 (VNN48_01640)	dprA	347672..348523 (+)	852	WP_213432921.1	DNA-processing protein DprA	Machinery gene
VNN48_RS01645 (VNN48_01645)	topA	348730..350880 (+)	2151	WP_165711717.1	type I DNA topoisomerase	-
VNN48_RS01650 (VNN48_01650)	trmFO	350926..352269 (+)	1344	WP_017370389.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
VNN48_RS01655 (VNN48_01655)	-	352343..352564 (-)	222	WP_252175013.1	hypothetical protein	-

Sequence

Protein

• Length: 283 a.a.
• Molecular weight: 32092.25 Da
• Isoelectric Point: 9.9870

>NTDB_id=918919 VNN48_RS01640 WP_213432921.1 347672..348523(+) (dprA) [Lactococcus formosensis strain PAQ-208]
MIKNFEILRLKKAGMSNLGILKLINYQERHEVKLTLRQFARIAEIKAIPNFIENYKSQDVKRLRKLYKLFPSFSILDDIY
PEWLKEIYNPPALLFYQGNLKLLNLPKLGFVGSRESSKEATKITHKLIEELKQNFVIVSGLARGVDTSSHVAAVKQKTPT
IAVIGNGLDISYPKENRKLQEYLATHELVLSEYLAGEQPLKFHFPERNRIIAGLSRGIVVVEAKQRSGSLITSRYALEGN
REVFAVPGDILNRNASGCNQLIQQGAAKLVTHGQDILDEFYLD

Nucleotide

• Length: 852 bp

>NTDB_id=918919 VNN48_RS01640 WP_213432921.1 347672..348523(+) (dprA) [Lactococcus formosensis strain PAQ-208]
ATGATTAAAAACTTTGAAATATTACGTTTGAAAAAAGCAGGAATGTCAAATCTTGGAATTTTGAAACTGATCAACTATCA
GGAAAGGCATGAAGTAAAGCTTACTTTACGACAATTTGCACGGATTGCAGAGATTAAAGCTATCCCAAATTTTATTGAGA
ATTATAAGAGTCAGGATGTTAAACGGCTACGAAAGCTATATAAGCTCTTCCCTTCGTTCTCCATTTTAGATGATATTTAT
CCAGAATGGTTAAAAGAAATATATAATCCTCCGGCACTCCTTTTTTACCAAGGAAATTTAAAATTACTTAATCTACCTAA
ACTTGGATTTGTAGGTAGCCGTGAAAGCTCCAAAGAAGCAACCAAAATTACGCATAAGCTTATTGAGGAATTAAAACAAA
ACTTTGTTATTGTGAGCGGATTGGCACGCGGTGTTGACACTTCTAGCCATGTAGCAGCTGTAAAGCAAAAAACTCCAACT
ATTGCTGTCATAGGTAATGGCTTAGATATTTCTTATCCAAAAGAAAATCGTAAATTACAAGAATATTTAGCAACACACGA
ATTAGTTTTATCAGAGTACCTTGCAGGAGAGCAACCGCTCAAGTTTCATTTCCCAGAGAGGAATAGAATCATTGCTGGTC
TTTCACGTGGGATTGTCGTTGTTGAAGCAAAACAACGTAGTGGAAGTCTCATTACAAGTCGATATGCATTAGAAGGGAAT
AGAGAGGTATTCGCTGTACCTGGAGATATTTTGAATCGAAATGCCTCAGGCTGTAATCAATTAATTCAACAGGGAGCTGC
TAAGCTTGTCACACACGGTCAAGATATTTTAGATGAATTTTATTTAGATTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (75-271)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	63.929	98.94	0.633
dprA	Streptococcus mutans UA159	56.631	98.587	0.558
dprA/cilB/dalA	Streptococcus pneumoniae D39	55.197	98.587	0.544
dprA/cilB/dalA	Streptococcus pneumoniae R6	55.197	98.587	0.544
dprA/cilB/dalA	Streptococcus mitis SK321	55.197	98.587	0.544
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	55.197	98.587	0.544
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	55.197	98.587	0.544
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	54.48	98.587	0.537
dprA	Haemophilus influenzae Rd KW20	39.781	96.82	0.385
dprA	Latilactobacillus sakei subsp. sakei 23K	37.153	100	0.378
dprA	Staphylococcus aureus N315	39.313	92.58	0.364