Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | VKI21_RS04765 | Genome accession | NZ_CP141255 |
| Coordinates | 1085392..1085757 (+) | Length | 121 a.a. |
| NCBI ID | WP_155084338.1 | Uniprot ID | A0A844GV49 |
| Organism | Cyanobacterium aponinum UTEX 3222 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1080392..1090757
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VKI21_RS04745 (VKI21_04745) | pgsA | 1081078..1081617 (+) | 540 | WP_015220738.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| VKI21_RS04750 (VKI21_04750) | ruvX | 1081659..1082090 (+) | 432 | WP_015220737.1 | Holliday junction resolvase RuvX | - |
| VKI21_RS04755 (VKI21_04755) | murA | 1082841..1084103 (+) | 1263 | WP_206602557.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| VKI21_RS04760 (VKI21_04760) | hpnH | 1084187..1085200 (+) | 1014 | WP_155084337.1 | adenosyl-hopene transferase HpnH | - |
| VKI21_RS04765 (VKI21_04765) | pilH | 1085392..1085757 (+) | 366 | WP_155084338.1 | response regulator | Machinery gene |
| VKI21_RS04770 (VKI21_04770) | - | 1086005..1086541 (+) | 537 | WP_015220733.1 | chemotaxis protein CheW | - |
| VKI21_RS04775 (VKI21_04775) | pilJ | 1086607..1089366 (+) | 2760 | WP_342597550.1 | methyl-accepting chemotaxis protein | Machinery gene |
| VKI21_RS04780 (VKI21_04780) | - | 1089474..1090238 (+) | 765 | WP_099435893.1 | MlaE family lipid ABC transporter permease subunit | - |
| VKI21_RS04785 (VKI21_04785) | - | 1090293..1090499 (+) | 207 | WP_342597551.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13753.16 Da Isoelectric Point: 7.7809
>NTDB_id=916422 VKI21_RS04765 WP_155084338.1 1085392..1085757(+) (pilH) [Cyanobacterium aponinum UTEX 3222]
MSTVLLVEDSIPTRKMISELLTKQGFNVEVANDGIQALEVLPNLRPDLVILDIIMPKMNGYEVCRKIKSDPQTKDLPVII
CSSKGEDFDRYWGIKQGADAYIAKPFREKELIATIKQFLKR
MSTVLLVEDSIPTRKMISELLTKQGFNVEVANDGIQALEVLPNLRPDLVILDIIMPKMNGYEVCRKIKSDPQTKDLPVII
CSSKGEDFDRYWGIKQGADAYIAKPFREKELIATIKQFLKR
Nucleotide
Download Length: 366 bp
>NTDB_id=916422 VKI21_RS04765 WP_155084338.1 1085392..1085757(+) (pilH) [Cyanobacterium aponinum UTEX 3222]
ATGAGTACAGTGTTACTTGTCGAAGATAGTATTCCGACAAGAAAAATGATTTCTGAACTATTAACCAAACAAGGTTTTAA
CGTAGAGGTAGCTAATGATGGGATTCAAGCCTTAGAAGTATTACCTAATCTTCGCCCTGATTTGGTTATATTGGATATTA
TCATGCCTAAAATGAATGGTTACGAAGTATGTCGTAAAATAAAATCTGATCCCCAAACCAAAGATTTACCTGTCATAATT
TGTTCATCAAAAGGAGAAGACTTTGATCGCTATTGGGGTATCAAACAAGGGGCGGATGCCTATATAGCCAAACCTTTCAG
AGAAAAAGAATTAATTGCTACTATTAAACAATTTTTAAAAAGATAA
ATGAGTACAGTGTTACTTGTCGAAGATAGTATTCCGACAAGAAAAATGATTTCTGAACTATTAACCAAACAAGGTTTTAA
CGTAGAGGTAGCTAATGATGGGATTCAAGCCTTAGAAGTATTACCTAATCTTCGCCCTGATTTGGTTATATTGGATATTA
TCATGCCTAAAATGAATGGTTACGAAGTATGTCGTAAAATAAAATCTGATCCCCAAACCAAAGATTTACCTGTCATAATT
TGTTCATCAAAAGGAGAAGACTTTGATCGCTATTGGGGTATCAAACAAGGGGCGGATGCCTATATAGCCAAACCTTTCAG
AGAAAAAGAATTAATTGCTACTATTAAACAATTTTTAAAAAGATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
65.833 |
99.174 |
0.653 |
| pilL-C | Synechocystis sp. PCC 6803 |
38.655 |
98.347 |
0.38 |
| scnR | Streptococcus mutans UA159 |
38.655 |
98.347 |
0.38 |
| micA | Streptococcus pneumoniae Cp1015 |
37.19 |
100 |
0.372 |
| vicR | Streptococcus mutans UA159 |
36.364 |
100 |
0.364 |
| chpA | Acinetobacter baumannii strain A118 |
37.931 |
95.868 |
0.364 |
| chiS | Vibrio cholerae strain A1552 |
38.938 |
93.388 |
0.364 |