Detailed information NTG0915063

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: TQH59_RS01125
• Genome accession: NZ_CP140708
• Coordinates: 228943..230307 (-)
• Length: 454 a.a.
• NCBI ID: WP_417885515.1
• Uniprot ID: -
• Organism: Acinetobacter johnsonii strain FAHZZU3567hy
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 223943..235307

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
TQH59_RS01110 (TQH59_01110)	lptG	225003..226073 (+)	1071	WP_125273428.1	LPS export ABC transporter permease LptG	-
TQH59_RS01115 (TQH59_01115)	gpmI	226197..227744 (+)	1548	WP_062033296.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
TQH59_RS01120 (TQH59_01120)	-	227763..228938 (+)	1176	WP_333641016.1	S41 family peptidase	-
TQH59_RS01125 (TQH59_01125)	pilR	228943..230307 (-)	1365	WP_417885515.1	sigma-54-dependent transcriptional regulator	Regulator
TQH59_RS01130 (TQH59_01130)	pilS	230380..231948 (-)	1569	WP_333641019.1	sensor histidine kinase	Regulator
TQH59_RS01135 (TQH59_01135)	-	231971..232606 (-)	636	WP_010325697.1	response regulator	-
TQH59_RS01140 (TQH59_01140)	-	232822..233877 (+)	1056	WP_125280619.1	serine hydrolase	-
TQH59_RS01145 (TQH59_01145)	thrC	233963..235102 (-)	1140	WP_058868731.1	threonine synthase	-

Sequence

Protein

• Length: 454 a.a.
• Molecular weight: 51065.75 Da
• Isoelectric Point: 6.8692

>NTDB_id=915063 TQH59_RS01125 WP_417885515.1 228943..230307(-) (pilR) [Acinetobacter johnsonii strain FAHZZU3567hy]
MQMSLSRMGIDTHIAYRLQEAVQALKTHQYDACLTDLNLPDGNGLSLVDFIAQNYPNLPVAVLTAYGNMDIAIAALKAGA
FDFVSKPINQKHLEQLLQKAFNQPISQLHIQEDTLEHRLLIGQSLPIQQLRITLKKIARSQAPVFITGESGTGKEVVANL
VHRLSNRNEGPFIAINCGAIPTELMESELFGHRKGSFTGATQDKQGLILSAHGGSLFLDEIAELPLTMQVKLLRAVQEKR
IRPIGSDTEIDVDFRVISASHQDLEALVQQGKFRQDLYFRIHVMDIVLPALRERGNDIILLAQHFIQKICQEWDIPVKPL
SERAREFLLAQYYPGNVRELRNMMERAITLSDESSIDLPHLQTAPLRPIAQTNYANATQQGSVGNDQLSHMPSRKLPEEG
LELYLEKIEKEILMNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDGEDDSV

Nucleotide

• Length: 1365 bp

>NTDB_id=915063 TQH59_RS01125 WP_417885515.1 228943..230307(-) (pilR) [Acinetobacter johnsonii strain FAHZZU3567hy]
ATGCAAATGTCTTTAAGTCGGATGGGGATTGATACACATATTGCCTATCGCTTACAAGAGGCGGTTCAAGCCCTGAAAAC
GCATCAATACGATGCCTGTCTAACCGATCTGAATTTACCCGATGGTAATGGTCTGAGCTTGGTCGATTTTATTGCTCAAA
ATTATCCTAATTTGCCTGTTGCAGTGCTGACTGCTTACGGCAATATGGATATTGCGATTGCAGCACTTAAAGCTGGTGCT
TTTGATTTTGTCAGCAAACCGATCAACCAAAAACATTTAGAGCAACTTTTACAAAAAGCCTTTAATCAGCCCATCAGTCA
GCTGCATATCCAAGAAGATACGCTTGAACATCGTCTGCTGATTGGTCAGTCCCTTCCTATTCAGCAGCTACGTATCACCT
TAAAGAAAATTGCACGCTCGCAAGCCCCTGTCTTTATTACAGGTGAGTCAGGCACTGGCAAAGAAGTGGTGGCGAATCTG
GTACATCGCCTGAGCAATCGTAATGAAGGGCCATTTATTGCCATTAACTGCGGTGCCATACCGACTGAACTGATGGAAAG
TGAATTGTTTGGACACCGTAAGGGTAGCTTTACAGGGGCGACTCAAGACAAACAAGGGCTGATTCTATCTGCGCATGGCG
GCAGTTTATTTTTAGATGAAATTGCTGAGTTACCACTCACTATGCAGGTAAAACTGCTGCGCGCGGTACAAGAAAAACGT
ATTCGTCCCATTGGGAGTGATACCGAAATTGATGTCGATTTCCGTGTGATTAGTGCCAGCCATCAAGACTTAGAAGCACT
GGTGCAACAAGGCAAGTTCCGTCAGGATTTATACTTCCGCATCCATGTCATGGACATTGTGCTGCCTGCCCTACGTGAGC
GTGGCAATGATATTATTCTTTTGGCACAACATTTCATTCAGAAAATCTGCCAAGAATGGGACATCCCTGTCAAACCACTG
AGTGAACGTGCACGTGAGTTTTTATTGGCCCAATATTATCCAGGCAATGTGCGTGAACTACGCAACATGATGGAACGTGC
CATCACCTTAAGTGATGAAAGCAGTATCGACTTACCACACTTGCAAACAGCCCCACTGCGACCGATTGCTCAGACCAACT
ATGCCAATGCCACGCAACAAGGTAGTGTTGGCAATGATCAACTCAGTCATATGCCTTCGCGTAAATTACCCGAAGAGGGT
TTAGAGCTGTATTTAGAAAAAATTGAAAAAGAAATTTTGATGAATGCGCTCAATCTCACCCATTGGAACCGAACACTGGC
GGCTAAAAAGCTCGGCATGTCTTTCCGTTCTTTACGTTATCGCTTGAAGAAATTCGGACTAGATGGCGAAGATGATTCCG
TTTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (4-97)

• Bacterial regulatory protein, Fis family (HTH_8) (405-445)

• Sigma-54 interaction domain (Sigma54_activat) (120-286)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	74.558	99.559	0.742
pilR	Pseudomonas aeruginosa PAK	48.78	99.339	0.485