Detailed information NTG0908320

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: SOI71_RS01610
• Genome accession: NZ_CP139251
• Coordinates: 344250..345308 (+)
• Length: 352 a.a.
• NCBI ID: WP_005067078.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain MCR53
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 339250..350308

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SOI71_RS01595 (SOI71_01595)	-	340352..340684 (+)	333	WP_068563962.1	hypothetical protein	-
SOI71_RS01600 (SOI71_01600)	rrmA	340687..341511 (+)	825	WP_104075356.1	putative RNA methyltransferase	-
SOI71_RS01605 (SOI71_01605)	ponA	341527..344088 (-)	2562	WP_146064300.1	penicillin-binding protein PBP1a	-
SOI71_RS01610 (SOI71_01610)	pilM	344250..345308 (+)	1059	WP_005067078.1	pilus assembly protein PilM	Machinery gene
SOI71_RS01615 (SOI71_01615)	pilN	345308..345949 (+)	642	WP_104075355.1	PilN domain-containing protein	Machinery gene
SOI71_RS01620 (SOI71_01620)	pilO	345946..346698 (+)	753	WP_063097770.1	type 4a pilus biogenesis protein PilO	Machinery gene
SOI71_RS01625 (SOI71_01625)	pilP	346709..347236 (+)	528	WP_002116864.1	pilus assembly protein PilP	Machinery gene
SOI71_RS01630 (SOI71_01630)	pilQ	347299..349425 (+)	2127	WP_104075354.1	type IV pilus secretin PilQ family protein	Machinery gene
SOI71_RS01635 (SOI71_01635)	aroK	349437..350006 (+)	570	WP_032004887.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39068.65 Da
• Isoelectric Point: 4.4657

>NTDB_id=908320 SOI71_RS01610 WP_005067078.1 344250..345308(+) (pilM) [Acinetobacter pittii strain MCR53]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALTPLPENSVVEKNILNPEAVAEALERAMNLANPHTTNAAI
AVPTSTVIHKTIEMDADMNDDEREVQIRLDAEQYIPFPLDEVSLDFEVLPDRLPNPNRVNVLLVATRTENVETRVEVLEL
VDLTPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
AGRAKKERSLPDDYDIEILEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=908320 SOI71_RS01610 WP_005067078.1 344250..345308(+) (pilM) [Acinetobacter pittii strain MCR53]
GTGCTCAGGTTATATCGTAAACCGAATAAGGGGTTAATGGGCGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTTAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTAACGCCTTTACCTGAGAACAGTGTAGTTGAAAAAAATA
TTTTGAATCCAGAAGCAGTTGCAGAAGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCACACCACTAACGCTGCAATT
GCTGTTCCAACATCGACGGTTATTCATAAAACCATCGAAATGGATGCAGATATGAACGATGATGAACGTGAAGTTCAGAT
TCGATTAGATGCGGAGCAATATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTACCAGATCGACTGC
CGAATCCAAATCGTGTGAATGTACTTTTAGTCGCAACACGAACAGAAAATGTTGAAACACGCGTAGAAGTACTGGAACTG
GTTGATTTAACGCCTAAGCTTGCTGATGTTGAAAGTTATGCTGTCGAGCGTGCTTTTAGTGTGTTTGCTGATAGCTTACC
CATGGGTGCAAATACCATTGGTATTTTAGATATTGGCCATACCATGACGACATTATCGGTTATGCAAAATGGCAAAATCA
TTTATACGCGTGAACAAGTCTTTGGCGGTAAACAGCTTACTTTGGAAATTCAAAGCCGTTACGGTTTGTCATTAGAAGAA
GCGGGACGCGCTAAAAAAGAACGTTCTTTGCCAGATGATTATGACATCGAAATCTTAGAACCATTTTTAGATGCTGTAGT
TCAGCAAGCTGCTAGATCTCTACAATTTTTCTTCTCTTCATCCCAATTCAATGAAATTGACCATATTTTGCTAGCGGGTG
GCAATGCCAACATTCCAGGGCTTGCTAAATTATTGCAACAAAAACTCGGTTACCGAGTCACTATTGCCAATCCATTTTTA
CAAATGGGTTTCTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCTTCATTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	96.307	100	0.963
comM	Acinetobacter nosocomialis M2	96.307	100	0.963
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	41.808	100	0.42