Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | R2E40_RS18360 | Genome accession | NZ_CP137631 |
| Coordinates | 3984767..3985087 (+) | Length | 106 a.a. |
| NCBI ID | WP_011707247.1 | Uniprot ID | A0AAX0XL99 |
| Organism | Aeromonas sp. CD | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3979767..3990087
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R2E40_RS18335 (R2E40_18335) | trhA | 3980404..3981039 (-) | 636 | WP_016351856.1 | PAQR family membrane homeostasis protein TrhA | - |
| R2E40_RS18340 (R2E40_18340) | - | 3981264..3982769 (+) | 1506 | WP_318164081.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| R2E40_RS18345 (R2E40_18345) | - | 3982874..3983425 (+) | 552 | WP_042067696.1 | septation protein A | - |
| R2E40_RS18350 (R2E40_18350) | - | 3983451..3983747 (+) | 297 | WP_005309589.1 | YciI family protein | - |
| R2E40_RS18355 (R2E40_18355) | cysQ | 3983828..3984598 (-) | 771 | WP_318164082.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| R2E40_RS18360 (R2E40_18360) | comEA | 3984767..3985087 (+) | 321 | WP_011707247.1 | ComEA family DNA-binding protein | Machinery gene |
| R2E40_RS18365 (R2E40_18365) | galU | 3985183..3986094 (+) | 912 | WP_269385099.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| R2E40_RS18370 (R2E40_18370) | - | 3986308..3987705 (+) | 1398 | WP_011707249.1 | peptide MFS transporter | - |
| R2E40_RS18375 (R2E40_18375) | - | 3987779..3988750 (-) | 972 | WP_269385096.1 | response regulator | - |
| R2E40_RS18380 (R2E40_18380) | - | 3989091..3989768 (+) | 678 | WP_318164083.1 | DnaT-like ssDNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11183.03 Da Isoelectric Point: 9.5773
>NTDB_id=899556 R2E40_RS18360 WP_011707247.1 3984767..3985087(+) (comEA) [Aeromonas sp. CD]
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVTAAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVTAAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=899556 R2E40_RS18360 WP_011707247.1 3984767..3985087(+) (comEA) [Aeromonas sp. CD]
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAACCTCTGCTGGCCGCCGACAA
GCCTGCAGCCAAGCCGGCAACCACGGTCACCGCCGCCAAGGAGAGCGGCAAGGTGAACCTCAACACCGCCAGTATCAATG
AGTTGACTGCGCTCAAGGGCATTGGTGAGAAGAAGGCCCAGGCCATCGTCGATTACCGCGAGAAGCAGGGCAAGTTCACT
ACCGTGGATCAGCTGGCCGATGTGAGCGGCATCGGGCCGGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAACCTCTGCTGGCCGCCGACAA
GCCTGCAGCCAAGCCGGCAACCACGGTCACCGCCGCCAAGGAGAGCGGCAAGGTGAACCTCAACACCGCCAGTATCAATG
AGTTGACTGCGCTCAAGGGCATTGGTGAGAAGAAGGCCCAGGCCATCGTCGATTACCGCGAGAAGCAGGGCAAGTTCACT
ACCGTGGATCAGCTGGCCGATGTGAGCGGCATCGGGCCGGCCACGCTGGAAGCAAATCGGGACATGATTATCGTCAAGTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae strain A1552 |
53.636 |
100 |
0.557 |
| comEA | Vibrio cholerae C6706 |
53.636 |
100 |
0.557 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
43.243 |
100 |
0.453 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
46.939 |
92.453 |
0.434 |
| comEA | Legionella pneumophila strain ERS1305867 |
41.837 |
92.453 |
0.387 |
| comEA | Legionella pneumophila str. Paris |
41.837 |
92.453 |
0.387 |
| comEA | Vibrio campbellii strain DS40M4 |
41 |
94.34 |
0.387 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
63.492 |
59.434 |
0.377 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
51.316 |
71.698 |
0.368 |