Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   R5U37_RS04895 Genome accession   NZ_CP137476
Coordinates   951253..952521 (+) Length   422 a.a.
NCBI ID   WP_002294136.1    Uniprot ID   A0A1A7T0B9
Organism   Enterococcus faecium strain HMC8C-1     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 946253..957521
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R5U37_RS04870 (R5U37_04890) tsf 946989..947870 (+) 882 WP_002293878.1 translation elongation factor Ts -
  R5U37_RS04875 (R5U37_04895) pyrH 948006..948728 (+) 723 WP_002297402.1 UMP kinase -
  R5U37_RS04880 (R5U37_04900) frr 948731..949288 (+) 558 WP_002293875.1 ribosome recycling factor -
  R5U37_RS04885 (R5U37_04905) - 949483..950295 (+) 813 WP_002294134.1 isoprenyl transferase -
  R5U37_RS04890 (R5U37_04910) - 950292..951092 (+) 801 WP_002319366.1 phosphatidate cytidylyltransferase -
  R5U37_RS04895 (R5U37_04915) eeP 951253..952521 (+) 1269 WP_002294136.1 RIP metalloprotease RseP Regulator
  R5U37_RS04900 (R5U37_04920) - 952589..954298 (+) 1710 WP_002323955.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46076.51 Da        Isoelectric Point: 4.8405

>NTDB_id=898189 R5U37_RS04895 WP_002294136.1 951253..952521(+) (eeP) [Enterococcus faecium strain HMC8C-1]
MKTILTFIIVFGILVIVHEFGHFFFAKRSGILVREFAIGMGPKIYGHQAKDGTTYTLRLLPIGGYVRMAGNGDDETEMAP
GMPLSLLLNSDGIVEKINLSKKIQLTNAIPMELSRYDLEDELTITGYVNGDETEVVTYPVDHDATIIENDGTEIRIAPKD
VQFQSAKLWQRMLTNFAGPMNNFILAIVLFIILAFMQGGVQVTNTNRVGEIMPNGAAAEAGLKENDEVVSVDGKEIHSWN
DLTTVITKNPGKTLDFKIEREGQVQSVDVTPKSVESNGEKVGQLGIKAPMNTGFMDKIIGGTRQAFSGSLEIFKALGSLF
TGFSLDKLGGPVMMYQLSSEAANQGVTTVISLMALLSMNLGIVNLLPIPALDGGKLVLNIFEGIRGKPLSQEKEGILTLA
GFGFLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=898189 R5U37_RS04895 WP_002294136.1 951253..952521(+) (eeP) [Enterococcus faecium strain HMC8C-1]
ATGAAAACGATTCTGACATTTATCATCGTTTTTGGTATATTAGTGATTGTTCATGAATTTGGTCATTTCTTCTTTGCGAA
ACGATCAGGAATCCTCGTTCGCGAATTTGCTATCGGTATGGGTCCGAAAATTTATGGGCATCAAGCAAAAGACGGGACAA
CATATACGCTTCGCCTATTACCTATTGGCGGTTATGTTCGAATGGCAGGCAATGGGGATGATGAAACAGAAATGGCACCA
GGAATGCCTCTTTCTCTTTTACTAAATTCTGACGGCATCGTAGAGAAGATAAACTTAAGTAAGAAAATCCAATTGACAAA
TGCTATCCCGATGGAATTGAGCCGTTATGATTTAGAAGATGAGCTGACTATCACTGGTTATGTGAATGGAGACGAAACAG
AAGTAGTAACCTACCCTGTTGATCACGATGCGACGATTATTGAAAACGACGGAACAGAAATCAGAATTGCGCCAAAAGAC
GTACAGTTCCAATCGGCTAAATTGTGGCAGCGTATGCTGACCAACTTTGCTGGACCCATGAATAACTTTATTTTGGCAAT
CGTGTTATTCATCATTCTGGCATTTATGCAAGGTGGTGTTCAAGTGACGAACACTAATCGCGTAGGAGAGATCATGCCTA
ATGGAGCTGCGGCAGAAGCAGGCTTAAAAGAAAATGATGAGGTAGTCAGTGTGGACGGAAAAGAAATCCATTCATGGAAT
GATCTGACAACAGTCATTACGAAAAATCCAGGTAAAACATTAGACTTTAAGATCGAACGAGAAGGTCAGGTGCAATCTGT
CGACGTGACACCGAAATCTGTAGAGTCAAATGGCGAAAAAGTTGGCCAACTTGGTATAAAAGCCCCAATGAATACAGGTT
TTATGGATAAGATCATTGGAGGGACGCGTCAAGCTTTCAGCGGTTCATTGGAAATTTTCAAAGCCTTAGGATCACTATTT
ACAGGTTTCAGTTTAGATAAATTAGGCGGACCTGTCATGATGTACCAATTGTCTTCAGAAGCAGCAAATCAAGGTGTAAC
AACTGTTATTAGTTTGATGGCGCTTCTTTCAATGAATCTCGGAATCGTCAATCTGCTTCCGATTCCTGCCTTAGATGGCG
GGAAATTAGTCTTGAATATTTTTGAAGGGATTCGCGGGAAACCATTAAGTCAAGAAAAAGAAGGAATATTGACATTAGCT
GGCTTTGGATTTTTAATGTTGTTGATGGTGCTAGTTACATGGAACGATATTCAACGATTCTTTTTCTAG

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(199-270)

Peptidase family M50 (Peptidase_M50)

(6-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1A7T0B9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

54.206

100

0.55
  eeP Streptococcus thermophilus LMG 18311

53.972

100

0.547