Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   R4701_RS00665 Genome accession   NZ_CP137114
Coordinates   142832..143482 (-) Length   216 a.a.
NCBI ID   WP_000387330.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain 15P3054     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 137832..148482
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R4701_RS00645 - 138437..139618 (-) 1182 WP_000655934.1 hypothetical protein -
  R4701_RS00650 - 139622..140209 (-) 588 WP_000939880.1 ATP-binding cassette domain-containing protein -
  R4701_RS00655 - 140242..140459 (-) 218 Protein_130 hypothetical protein -
  R4701_RS00660 comEC/celB 140608..142848 (-) 2241 WP_000942406.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  R4701_RS00665 comEA/celA/cilE 142832..143482 (-) 651 WP_000387330.1 ComEA family DNA-binding protein Machinery gene
  R4701_RS00670 - 143550..144119 (-) 570 WP_000443899.1 GNAT family N-acetyltransferase -
  R4701_RS00675 ald 144296..145407 (+) 1112 Protein_134 alanine dehydrogenase -
  R4701_RS00680 - 145708..146034 (-) 327 Protein_135 TfoX/Sxy family protein -
  R4701_RS00685 - 146037..146537 (-) 501 WP_000566988.1 GNAT family N-acetyltransferase -
  R4701_RS00690 - 146730..147698 (-) 969 WP_000658183.1 PhoH family protein -
  R4701_RS00695 - 147784..147999 (-) 216 WP_001232082.1 YozE family protein -

Sequence

Protein


Download         Length: 216 a.a.        Molecular weight: 23229.65 Da        Isoelectric Point: 5.5171

>NTDB_id=896148 R4701_RS00665 WP_000387330.1 142832..143482(-) (comEA/celA/cilE) [Streptococcus pneumoniae strain 15P3054]
MEAIIEKIKEYKIIVICTGLGLLVGGFFLLKPAPQTPVKETNLQAEVAAVSKDLVSEKEVNKEEKEEPLEQDLITVDVKG
AVKSPGIYDLPVGSRVNDAVQKAGGLTEQADSKSLNLAQKVSDEALVYVPTKGEEAVSQQTGLGTASSISKEKKVNLNKA
SLEELKQVKGLGGKRAQDIIDHREANGKFKSVDELKKVSGIGGKTIEKLKDYVTVD

Nucleotide


Download         Length: 651 bp        

>NTDB_id=896148 R4701_RS00665 WP_000387330.1 142832..143482(-) (comEA/celA/cilE) [Streptococcus pneumoniae strain 15P3054]
ATGGAAGCAATTATCGAGAAAATCAAAGAGTATAAAATCATCGTCATCTGTACTGGTCTGGGCTTGCTTGTAGGAGGATT
TTTCCTGCTAAAACCAGCTCCACAAACACCTGTCAAAGAGACGAATTTGCAGGCTGAAGTCGCAGCTGTTTCCAAGGATT
TGGTATCCGAAAAGGAAGTGAACAAGGAAGAAAAGGAAGAACCCCTTGAACAAGATCTAATCACAGTAGATGTCAAAGGT
GCTGTCAAATCGCCAGGGATTTATGACTTGCCTGTAGGTAGTCGAGTCAATGATGCTGTTCAGAAGGCTGGTGGCTTGAC
AGAGCAAGCAGACAGCAAGTCGCTCAATCTAGCTCAGAAAGTTAGTGATGAGGCTCTGGTTTACGTTCCTACTAAGGGAG
AAGAAGCAGTTAGCCAACAGACTGGTTTGGGGACAGCTTCTTCAATAAGCAAGGAAAAGAAGGTCAATCTCAACAAGGCC
AGTCTGGAAGAACTCAAGCAGGTCAAGGGACTGGGAGGAAAACGAGCTCAGGACATTATCGACCATCGTGAGGCAAATGG
CAAGTTCAAGTCAGTAGACGAGCTCAAGAAGGTCTCTGGCATTGGTGGCAAAACAATAGAAAAGCTTAAAGACTATGTTA
CAGTGGATTAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(151-214)

SLBB domain (SLBB)

(76-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.