Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   RZ534_RS11435 Genome accession   NZ_CP136643
Coordinates   2229226..2230029 (-) Length   267 a.a.
NCBI ID   WP_008342226.1    Uniprot ID   A0A5K1NAR3
Organism   Bacillus altitudinis strain RS1     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2224226..2235029
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RZ534_RS11415 (RZ534_11415) - 2224233..2226305 (-) 2073 WP_025207603.1 sigma-54-dependent Fis family transcriptional regulator -
  RZ534_RS11420 (RZ534_11420) - 2226455..2226691 (+) 237 WP_017357960.1 DUF2627 domain-containing protein -
  RZ534_RS11425 (RZ534_11425) - 2226725..2227462 (-) 738 WP_017367573.1 glycerophosphodiester phosphodiesterase -
  RZ534_RS11430 (RZ534_11430) - 2227689..2228789 (-) 1101 WP_007501159.1 Rap family tetratricopeptide repeat protein -
  RZ534_RS11435 (RZ534_11435) spo0A 2229226..2230029 (-) 804 WP_008342226.1 sporulation transcription factor Spo0A Regulator
  RZ534_RS11440 (RZ534_11440) spoIVB 2230313..2231590 (-) 1278 WP_007501161.1 SpoIVB peptidase -
  RZ534_RS11445 (RZ534_11445) recN 2231789..2233522 (-) 1734 WP_135226713.1 DNA repair protein RecN Machinery gene
  RZ534_RS11450 (RZ534_11450) ahrC 2233557..2234006 (-) 450 WP_007501163.1 transcriptional regulator AhrC/ArgR -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29891.41 Da        Isoelectric Point: 6.3918

>NTDB_id=892137 RZ534_RS11435 WP_008342226.1 2229226..2230029(-) (spo0A) [Bacillus altitudinis strain RS1]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVSHRSSSIQNSVLRSKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=892137 RZ534_RS11435 WP_008342226.1 2229226..2230029(-) (spo0A) [Bacillus altitudinis strain RS1]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAACTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGACGGTCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGAAATGACCAAACAG
CCAAGTGTCATTATGCTGACGGCTTTCGGACAAGAAGACGTAACGAAAAAAGCAGTCGATTTGGGCGCATCCTATTTCAT
TTTGAAACCATTCGATATGGAAAACCTCGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTCAGCCATCGAT
CTTCATCTATCCAAAACAGTGTCCTTCGCAGCAAACCTGAACCGAAACGTAAGAACTTAGATGCGAGCATTACGACGATT
ATTCATGAGATTGGCGTGCCAGCTCATATTAAAGGTTATTTATACTTAAGAGAAGCCATTTCGATGGTGTACAATGATAT
TGAACTACTCGGCAGTATTACAAAAGTATTGTACCCAGACATTGCAAAGAAATTTAACACGACAGCCAGCAGGGTAGAAC
GAGCGATTCGCCATGCCATTGAAGTGGCTTGGAGTAGAGGGAATATTGACTCCATTTCGTCACTCTTTGGCTACACAGTC
AGCATGTCAAAAGCCAAACCGACCAATTCCGAATTTATTGCCATGGTGGCTGATCGTCTGCGTTTAGAGCATAGAGCAAG
CTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-120)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1NAR3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884