Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   RS399_RS08985 Genome accession   NZ_CP135973
Coordinates   1824013..1824153 (-) Length   46 a.a.
NCBI ID   WP_225516634.1    Uniprot ID   -
Organism   Bacillus inaquosorum strain SI3     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1819013..1829153
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RS399_RS08980 (RS399_08980) - 1822895..1824067 (-) 1173 Protein_1760 condensation domain-containing protein -
  RS399_RS08985 (RS399_08985) comS 1824013..1824153 (-) 141 WP_225516634.1 competence protein ComS Regulator
  RS399_RS08990 (RS399_08990) srfAB 1824245..1827289 (-) 3045 Protein_1762 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5274.07 Da        Isoelectric Point: 9.2422

>NTDB_id=888010 RS399_RS08985 WP_225516634.1 1824013..1824153(-) (comS) [Bacillus inaquosorum strain SI3]
MNRSSKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=888010 RS399_RS08985 WP_225516634.1 1824013..1824153(-) (comS) [Bacillus inaquosorum strain SI3]
TTGAACCGATCAAGCAAGCACCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTTTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978