Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   RS399_RS06200 Genome accession   NZ_CP135973
Coordinates   1240245..1241036 (-) Length   263 a.a.
NCBI ID   WP_019257833.1    Uniprot ID   A0A2M8SXB5
Organism   Bacillus inaquosorum strain SI3     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1235245..1246036
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RS399_RS06165 (RS399_06165) - 1236077..1236937 (-) 861 WP_084994296.1 alpha/beta fold hydrolase -
  RS399_RS06170 (RS399_06170) - 1236924..1237256 (-) 333 WP_084994298.1 SdpI family protein -
  RS399_RS06175 (RS399_06175) - 1237345..1237860 (-) 516 WP_084994300.1 SH3 domain-containing protein -
  RS399_RS06180 (RS399_06180) - 1238005..1238274 (-) 270 WP_003239709.1 YfhJ family protein -
  RS399_RS06185 (RS399_06185) - 1238399..1238551 (+) 153 WP_010330867.1 small, acid-soluble spore protein K -
  RS399_RS06190 (RS399_06190) - 1238585..1239778 (-) 1194 WP_084994302.1 MFS transporter -
  RS399_RS06195 (RS399_06195) - 1239916..1240236 (-) 321 WP_084994304.1 YfhH family protein -
  RS399_RS06200 (RS399_06200) recX 1240245..1241036 (-) 792 WP_019257833.1 recombination regulator RecX Regulator
  RS399_RS06205 (RS399_06205) - 1241125..1242036 (+) 912 WP_084994306.1 TIGR01777 family oxidoreductase -
  RS399_RS06210 (RS399_06210) - 1242091..1242201 (+) 111 WP_003223230.1 YfhE family protein -
  RS399_RS06215 (RS399_06215) - 1242268..1242459 (+) 192 WP_019257831.1 YfhD family protein -
  RS399_RS06220 (RS399_06220) - 1242498..1243082 (-) 585 WP_084994308.1 nitroreductase -
  RS399_RS06225 (RS399_06225) - 1243169..1244050 (-) 882 WP_084994309.1 PhzF family phenazine biosynthesis isomerase -
  RS399_RS06230 (RS399_06230) - 1244165..1245196 (-) 1032 WP_084994311.1 iron chelate uptake ABC transporter family permease subunit -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30870.13 Da        Isoelectric Point: 6.6693

>NTDB_id=888005 RS399_RS06200 WP_019257833.1 1240245..1241036(-) (recX) [Bacillus inaquosorum strain SI3]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKEISAPVIAEVIHKLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQMQLQRKGFSFDVISAALEQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=888005 RS399_RS06200 WP_019257833.1 1240245..1241036(-) (recX) [Bacillus inaquosorum strain SI3]
ATGCCATTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGGTTCAATATTTTTCTGGATGAAAAATACGCCTT
CAGCGTGGACGCGGACGTGCTCGTGAAATTTGAGCTCAAAAAGGGAAAAGAGCTTGATGACCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGATTTTTTATCCTACCGAATGAGGTCAACGAAAGAGGTT
GAGGACCACTTAAAGAAAAAAGAAATCTCGGCGCCCGTCATTGCGGAAGTCATCCATAAGCTCAACGACTATAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACCCACAAAAAAACGAACGGAAAAGGCCCTGACGTTTTGTTCAGAG
AGCTGAGAGCGAAGGGGATCGACGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAGGACCAGACAAGAGAA
GCGGTCAAACATGTTGAAAAGCTTCTCAAAAAAGATAAAAAACTTTCGACAAAAGAACTCAAACAGCGCGCCCAGATGCA
GCTTCAGCGCAAGGGTTTCTCATTTGATGTCATCAGCGCGGCGCTGGAGCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGTTGCGCCTTCATGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGTAAAGGATTCTCACTCGATTTAATCGAGCAATTTCTGCAGGAAGAGGAGTAG

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2M8SXB5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

96.958

100

0.97