Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   QN339_RS10315 Genome accession   NZ_CP135104
Coordinates   2057008..2057781 (+) Length   257 a.a.
NCBI ID   WP_000456084.1    Uniprot ID   A0AAD2WW20
Organism   Streptococcus agalactiae strain MA15     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2052008..2062781
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QN339_RS10305 (QN339_10290) rlmH 2055001..2055480 (-) 480 WP_000768333.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  QN339_RS10310 (QN339_10295) htrA 2055681..2056910 (+) 1230 WP_395083315.1 S1C family serine protease Regulator
  QN339_RS10315 (QN339_10300) spo0J 2057008..2057781 (+) 774 WP_000456084.1 ParB/RepB/Spo0J family partition protein Regulator
  QN339_RS10320 (QN339_10305) dnaA 2057980..2059341 (+) 1362 WP_000138202.1 chromosomal replication initiator protein DnaA -
  QN339_RS10325 (QN339_10310) dnaN 2059496..2060632 (+) 1137 WP_000581133.1 DNA polymerase III subunit beta -
  QN339_RS10330 (QN339_10315) - 2060690..2061582 (+) 893 Protein_1995 diacylglycerol/lipid kinase family protein -
  QN339_RS10335 (QN339_10320) - 2061592..2061789 (+) 198 WP_000285199.1 DUF951 domain-containing protein -
  QN339_RS10340 (QN339_10325) - 2061956..2062195 (+) 240 WP_410534360.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29239.71 Da        Isoelectric Point: 9.8145

>NTDB_id=885449 QN339_RS10315 WP_000456084.1 2057008..2057781(+) (spo0J) [Streptococcus agalactiae strain MA15]
MEYLETININHIAPNPYQPRLEFNTKELEELADSIKINGLIQPIIVRPSAVFGYELVAGERRLRAAKLAKLESIPAIIKS
YNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHEELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGH
ARALLSLPDASQQKDWYQRILTEDISVRRLEKLLKQEKKTNHKSLQNKDVFLKHQENELAQFLGSKVKLTINKDGAGNIK
IAFANQEELNRIINTLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=885449 QN339_RS10315 WP_000456084.1 2057008..2057781(+) (spo0J) [Streptococcus agalactiae strain MA15]
ATGGAATATTTAGAAACGATCAACATCAATCATATTGCTCCAAATCCGTATCAACCTCGCCTAGAATTTAATACAAAAGA
ACTAGAAGAATTAGCCGACTCTATTAAAATTAATGGCCTTATTCAACCCATTATTGTAAGACCGTCAGCAGTCTTTGGTT
ACGAACTGGTAGCCGGAGAACGACGGCTAAGAGCCGCAAAGTTAGCTAAATTGGAAAGTATACCTGCAATTATAAAATCC
TATAATAATGATGATAGTATGCAATTAGCTATTGTCGAAAATTTACAACGATCTAATTTGTCACCCATTGAAGAGGCTAA
AGCCTACTCTCAACTTCTACAAAAGAAAAGTATGACACATGAAGAGTTAGCAAAATATATGGGAAAATCTCGTCCCTATA
TATCAAATACGATACGACTACTAAATTTACCGCCACTAATTACTTCAGCTATTGAAGAAGGAAAACTTTCCTCTGGTCAT
GCGCGTGCACTACTCAGTCTACCAGATGCTAGTCAACAGAAAGATTGGTATCAGAGAATCCTCACTGAAGATATTAGTGT
AAGACGACTAGAGAAGTTATTAAAACAAGAAAAGAAAACAAATCATAAGTCACTTCAAAATAAAGATGTCTTTCTAAAAC
ATCAAGAAAATGAGTTAGCTCAATTTCTTGGTAGCAAAGTGAAACTTACTATTAATAAAGATGGTGCTGGCAATATAAAG
ATTGCTTTCGCTAACCAAGAAGAATTAAACAGAATTATCAACACTCTAAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.647

99.222

0.572