Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   QN339_RS10310 Genome accession   NZ_CP135104
Coordinates   2055681..2056910 (+) Length   409 a.a.
NCBI ID   WP_395083315.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain MA15     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2050681..2061910
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QN339_RS10285 (QN339_10270) - 2051843..2054422 (+) 2580 WP_000154429.1 YfhO family protein -
  QN339_RS10305 (QN339_10290) rlmH 2055001..2055480 (-) 480 WP_000768333.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  QN339_RS10310 (QN339_10295) htrA 2055681..2056910 (+) 1230 WP_395083315.1 S1C family serine protease Regulator
  QN339_RS10315 (QN339_10300) spo0J 2057008..2057781 (+) 774 WP_000456084.1 ParB/RepB/Spo0J family partition protein Regulator
  QN339_RS10320 (QN339_10305) dnaA 2057980..2059341 (+) 1362 WP_000138202.1 chromosomal replication initiator protein DnaA -
  QN339_RS10325 (QN339_10310) dnaN 2059496..2060632 (+) 1137 WP_000581133.1 DNA polymerase III subunit beta -
  QN339_RS10330 (QN339_10315) - 2060690..2061582 (+) 893 Protein_1995 diacylglycerol/lipid kinase family protein -
  QN339_RS10335 (QN339_10320) - 2061592..2061789 (+) 198 WP_000285199.1 DUF951 domain-containing protein -

Sequence


Protein


Download         Length: 409 a.a.        Molecular weight: 43117.56 Da        Isoelectric Point: 9.5271

>NTDB_id=885448 QN339_RS10310 WP_395083315.1 2055681..2056910(+) (htrA) [Streptococcus agalactiae strain MA15]
MKKKLVSSLLKCSLIIIVSFAGGAFASFVMNHNDNIPNGGVTKTSKVNYNNITPTTKAVKKVQNSVVSVINYKQQESRSD
LSDFYSHFFGNQGGNTDKGLQVYGEGSGVIYKKDGKNAYVVTNNHVIDGAKQIEIQLADGSKAVGKLVGSDTYSDLAVVK
IPSDKVSNIAEFADSSKLNIGETAIAIGSPLGTEYANSVTQGIVSSLKRTVTMTNEEGQTVSTNAIQTDAAINPGNSGGA
LINIEGQVIGINSSKISSTSNQTSGQSSGNNVEGMGFAIPSNDVVKIINQLESNGQVERPALGISMAGLSNLPSDVISKL
KIPSNVTNGIVVASIQSGMPAQGKLKKYDVITKVDDKEVASPSDLQSLLYGHQVGDSITVTFYRGENKQTVTIKLTKTSK
DLAKQRANN

Nucleotide


Download         Length: 1230 bp        

>NTDB_id=885448 QN339_RS10310 WP_395083315.1 2055681..2056910(+) (htrA) [Streptococcus agalactiae strain MA15]
GTGAAAAAAAAATTAGTCTCATCACTTCTAAAGTGTTCTCTAATCATTATTGTTAGCTTTGCTGGTGGAGCATTTGCTAG
TTTTGTCATGAATCATAATGACAATATTCCAAATGGTGGTGTCACTAAAACTAGTAAAGTAAATTATAATAACATAACGC
CTACAACAAAAGCTGTTAAAAAGGTACAAAATAGTGTTGTTTCTGTTATCAATTATAAACAACAAGAGAGTCGTTCTGAC
CTATCAGACTTCTATAGTCATTTTTTTGGTAATCAGGGAGGCAACACTGATAAGGGCTTACAAGTTTACGGTGAAGGCTC
TGGAGTCATCTATAAAAAAGATGGTAAAAATGCCTATGTTGTCACTAATAACCACGTCATTGATGGGGCTAAACAAATTG
AAATTCAACTAGCCGATGGCTCAAAAGCAGTTGGGAAACTTGTTGGGTCAGATACCTACTCTGATTTAGCCGTCGTCAAA
ATTCCATCAGATAAAGTTTCAAATATTGCAGAATTTGCTGATTCATCAAAACTCAACATTGGTGAAACTGCTATAGCGAT
CGGAAGCCCTCTTGGAACTGAGTATGCAAATTCTGTAACTCAAGGTATTGTATCTAGTTTAAAAAGAACTGTAACAATGA
CTAATGAAGAAGGACAAACAGTTTCTACAAATGCTATCCAGACTGATGCTGCTATCAATCCTGGTAATTCAGGTGGAGCA
CTTATCAATATTGAAGGACAGGTTATTGGAATTAATTCTAGTAAAATTTCTTCTACATCAAATCAAACCTCAGGACAATC
GTCAGGAAATAACGTTGAAGGTATGGGATTTGCCATTCCTTCAAATGATGTTGTTAAGATTATCAATCAACTTGAGAGTA
ACGGACAAGTAGAGAGACCTGCTCTAGGTATTTCTATGGCTGGATTAAGTAATTTACCATCCGATGTTATTAGTAAACTG
AAAATCCCAAGTAATGTTACTAATGGTATTGTAGTAGCATCTATCCAATCTGGCATGCCAGCTCAAGGCAAACTAAAGAA
ATACGATGTCATTACTAAAGTTGACGATAAAGAAGTAGCATCTCCAAGTGATTTACAAAGTTTACTCTATGGCCACCAGG
TAGGAGATTCCATAACAGTAACCTTTTATCGTGGTGAAAATAAACAAACAGTCACTATAAAACTTACTAAAACTAGTAAA
GATTTAGCTAAACAACGAGCAAATAACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

63.359

96.088

0.609

  htrA Streptococcus gordonii str. Challis substr. CH1

57.107

98.044

0.56

  htrA Streptococcus mitis NCTC 12261

56.281

97.311

0.548

  htrA Streptococcus pneumoniae TIGR4

54.791

99.511

0.545

  htrA Streptococcus pneumoniae Rx1

54.791

99.511

0.545

  htrA Streptococcus pneumoniae D39

54.791

99.511

0.545

  htrA Streptococcus pneumoniae R6

54.791

99.511

0.545