Detailed information NTG0877793

Bioinformatically predicted

Overview

• Name: cinA
• Type: Machinery gene
• Locus tag: RIM63_RS09960
• Genome accession: NZ_CP133952
• Coordinates: 2047346..2048617 (-)
• Length: 423 a.a.
• NCBI ID: WP_317584126.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus strain HT321
• Function: require for competence (predicted from homology) Unclear

Genomic Context

Location: 2042346..2053617

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RIM63_RS09935 (RIM63_09935)	-	2044236..2044535 (-)	300	WP_012516437.1	DUF1292 domain-containing protein	-
RIM63_RS09940 (RIM63_09940)	ruvX	2044545..2044964 (-)	420	WP_111678736.1	Holliday junction resolvase RuvX	-
RIM63_RS09945 (RIM63_09945)	-	2044961..2045230 (-)	270	WP_012516439.1	IreB family regulatory phosphoprotein	-
RIM63_RS09950 (RIM63_09950)	spx	2045343..2045741 (-)	399	WP_012516440.1	transcriptional regulator Spx	-
RIM63_RS09955 (RIM63_09955)	recA	2046116..2047252 (-)	1137	WP_317584124.1	recombinase RecA	Machinery gene
RIM63_RS09960 (RIM63_09960)	cinA	2047346..2048617 (-)	1272	WP_317584126.1	competence/damage-inducible protein A	Machinery gene
RIM63_RS09965 (RIM63_09965)	-	2049303..2049593 (-)	291	WP_012516443.1	hypothetical protein	-
RIM63_RS09970 (RIM63_09970)	-	2049587..2050159 (-)	573	WP_038674692.1	phosphlipase A2 SlaA	-
RIM63_RS09975 (RIM63_09975)	-	2050456..2051301 (+)	846	WP_206158790.1	helix-turn-helix domain-containing protein	-
RIM63_RS09980 (RIM63_09980)	-	2051745..2052296 (-)	552	WP_231199620.1	DNA-3-methyladenine glycosylase I	-
RIM63_RS09985 (RIM63_09985)	ruvA	2052306..2052902 (-)	597	WP_115251409.1	Holliday junction branch migration protein RuvA	-

Sequence

Protein

• Length: 423 a.a.
• Molecular weight: 45808.56 Da
• Isoelectric Point: 5.8304

>NTDB_id=877793 RIM63_RS09960 WP_317584126.1 2047346..2048617(-) (cinA) [Streptococcus equi subsp. zooepidemicus strain HT321]
MKAELIAVGTEILTGQIVNTNAQFLSEKMAELGIDVYFQTAVGDNEERLLSVIDIASQRSDLVILCGGLGPTDDDLTKQT
LAKYLGKALVFDEQAGQKLDAFFAHRKQAVRTPNNQRQVQLIEGSIALQNQTGLAVGGLITVDRVTYVVLPGPPSELKPM
VKNELVPLLSASHASLYSRVLRFFGIGESQLVTALEDLIKHQTDPTIAPYAKTGEVTLRLSTKADNQALADERLDRLEAQ
LLSIKTVDNQPLRRLLYGYGEDNSLARETFELLKRSGKTITAAESLTAGLFQAQLTDFAGASQVFNGGFITYSIEEKARM
LGIPLGELQRHGVVSSFTAEQMAAQARCLTNSDIGIGLTGIAGPEALEGQPAGTVFIGLATKNKVESLKVVIGGRSRLDV
RYIAALYAFNMVRKTLLKSENLL

Nucleotide

• Length: 1272 bp

>NTDB_id=877793 RIM63_RS09960 WP_317584126.1 2047346..2048617(-) (cinA) [Streptococcus equi subsp. zooepidemicus strain HT321]
ATGAAAGCTGAACTCATTGCGGTGGGAACCGAGATTCTGACTGGTCAGATTGTGAATACCAATGCTCAATTTTTATCAGA
AAAAATGGCAGAGCTTGGTATTGATGTTTATTTTCAAACAGCTGTAGGAGATAATGAAGAGCGTTTGCTTTCTGTTATTG
ATATTGCTAGCCAGCGAAGTGATTTAGTGATTTTATGTGGTGGTCTTGGTCCAACAGATGATGATCTAACGAAGCAGACC
TTAGCTAAGTATCTAGGAAAAGCTTTGGTCTTTGATGAGCAGGCAGGTCAAAAATTAGATGCTTTTTTTGCACATCGTAA
GCAGGCTGTTAGGACACCAAATAACCAACGTCAGGTGCAGCTGATTGAAGGCTCTATTGCTTTGCAAAATCAAACAGGAC
TTGCAGTAGGTGGGTTAATAACTGTAGATAGGGTAACCTATGTTGTCTTACCAGGGCCTCCAAGTGAGCTAAAGCCTATG
GTAAAAAATGAGCTGGTGCCCCTTCTTTCAGCTAGTCATGCCAGTCTATATTCAAGAGTGCTGCGTTTTTTTGGCATTGG
TGAAAGTCAACTGGTGACTGCTCTGGAGGATTTGATTAAGCATCAAACAGATCCTACCATTGCTCCTTATGCAAAGACCG
GCGAGGTAACACTGCGACTATCCACAAAGGCTGACAACCAAGCATTAGCTGATGAAAGGCTGGATCGACTAGAGGCGCAG
CTCTTATCCATAAAAACTGTAGATAATCAACCCTTACGGCGTTTGCTTTATGGCTATGGGGAGGATAATTCCTTGGCGCG
TGAGACCTTTGAGCTATTGAAGCGAAGTGGTAAGACGATAACAGCAGCTGAAAGCTTAACAGCAGGACTGTTTCAGGCTC
AGCTAACTGATTTTGCGGGAGCTTCACAGGTGTTTAACGGTGGCTTTATCACCTACAGCATTGAAGAAAAAGCAAGAATG
CTTGGCATTCCATTGGGTGAGCTACAAAGGCACGGTGTTGTGAGCTCTTTTACAGCTGAACAAATGGCTGCGCAGGCACG
CTGCTTGACCAATTCAGATATCGGTATTGGTCTAACAGGTATTGCTGGCCCAGAGGCACTCGAGGGACAGCCAGCAGGAA
CAGTTTTCATTGGCCTTGCCACTAAGAATAAGGTAGAATCTCTTAAAGTTGTTATAGGAGGCCGTAGCCGTTTGGACGTG
CGGTATATTGCTGCCCTATATGCTTTTAATATGGTTCGTAAAACTTTATTAAAATCAGAGAATTTGCTATAA

Domains

Predicted by InterProScan.

• Damage-inducible protein CinA KH domain (CinA_KH) (178-241)

• Competence-damaged protein (CinA) (263-416)

• Probable molybdopterin binding domain (MoCF_biosynth) (5-169)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cinA	Streptococcus mutans UA159	70.449	100	0.704
cinA	Streptococcus mitis NCTC 12261	70.024	98.582	0.69
cinA	Streptococcus pneumoniae D39	69.784	98.582	0.688
cinA	Streptococcus mitis SK321	69.784	98.582	0.688
cinA	Streptococcus pneumoniae TIGR4	69.544	98.582	0.686
cinA	Streptococcus pneumoniae Rx1	69.544	98.582	0.686
cinA	Streptococcus pneumoniae R6	69.544	98.582	0.686
cinA	Streptococcus suis isolate S10	53.938	99.054	0.534
cinA	Bacillus subtilis subsp. subtilis str. 168	47.368	98.818	0.468