Detailed information NTG0866362

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: WHP83_RS04880
• Genome accession: NZ_CP148154
• Coordinates: 937939..938889 (-)
• Length: 316 a.a.
• NCBI ID: WP_002867402.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain Z1323HCJ0086
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 932939..943889

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WHP83_RS04845 (WHP83_04845)	ccoS	933127..933333 (+)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-
WHP83_RS04850 (WHP83_04850)	-	933356..933658 (-)	303	WP_002852762.1	cytochrome c	-
WHP83_RS04855 (WHP83_04855)	gmhB	933739..934300 (+)	562	Protein_939	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
WHP83_RS04860 (WHP83_04860)	rfaD	934301..935254 (+)	954	WP_234728994.1	ADP-glyceromanno-heptose 6-epimerase	-
WHP83_RS04865 (WHP83_04865)	rfaE1	935247..936632 (+)	1386	WP_002867399.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
WHP83_RS04870 (WHP83_04870)	gmhA	936629..937189 (+)	561	WP_002867400.1	D-sedoheptulose 7-phosphate isomerase	-
WHP83_RS04875 (WHP83_04875)	-	937189..937953 (+)	765	WP_002867401.1	glycosyltransferase family 25 protein	-
WHP83_RS04880 (WHP83_04880)	waaF	937939..938889 (-)	951	WP_002867402.1	lipopolysaccharide heptosyltransferase II	Regulator
WHP83_RS04885 (WHP83_04885)	-	938948..939769 (+)	822	WP_002867403.1	glycosyltransferase family 2 protein	-
WHP83_RS04890 (WHP83_04890)	-	939840..940796 (+)	957	WP_002867404.1	UDP-glucuronic acid decarboxylase family protein	-
WHP83_RS04895 (WHP83_04895)	-	940802..942100 (+)	1299	WP_002867405.1	UDP-glucose/GDP-mannose dehydrogenase family protein	-
WHP83_RS04900 (WHP83_04900)	galE	942097..943071 (+)	975	WP_146263329.1	UDP-glucose 4-epimerase GalE	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36324.91 Da
• Isoelectric Point: 10.3207

>NTDB_id=866362 WHP83_RS04880 WP_002867402.1 937939..938889(-) (waaF) [Campylobacter jejuni strain Z1323HCJ0086]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLDIKAHFKDLKLPFKLKFKSPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNQNARWVHLDLACMPCMQKTCPLKHHKCMKDLKPEVILKAIQNLTNI

Nucleotide

• Length: 951 bp

>NTDB_id=866362 WHP83_RS04880 WP_002867402.1 937939..938889(-) (waaF) [Campylobacter jejuni strain Z1323HCJ0086]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGACATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTAAAAGCCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACTATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAATGCAAGATGGGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAACCTGAAGTGATTTTAAAGGCAATTCAAAATTTAACTAATATCTAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	92.652	99.051	0.918