Detailed information NTG0862539

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: Q4617_RS01675
• Genome accession: NZ_CP131470
• Coordinates: 354683..355741 (+)
• Length: 352 a.a.
• NCBI ID: WP_004951546.1
• Uniprot ID: -
• Organism: Acinetobacter junii strain SC22
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 349683..360741

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q4617_RS01660 (Q4617_01660)	mraY	349935..351053 (+)	1119	WP_112986738.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
Q4617_RS01665 (Q4617_01665)	-	351108..351926 (+)	819	WP_004964610.1	putative RNA methyltransferase	-
Q4617_RS01670 (Q4617_01670)	ponA	351941..354520 (-)	2580	WP_112986739.1	penicillin-binding protein PBP1a	-
Q4617_RS01675 (Q4617_01675)	pilM	354683..355741 (+)	1059	WP_004951546.1	pilus assembly protein PilM	Machinery gene
Q4617_RS01680 (Q4617_01680)	pilN	355741..356385 (+)	645	WP_004909633.1	PilN domain-containing protein	Machinery gene
Q4617_RS01685 (Q4617_01685)	pilO	356382..357122 (+)	741	WP_075696026.1	type 4a pilus biogenesis protein PilO	Machinery gene
Q4617_RS01690 (Q4617_01690)	pilP	357122..357649 (+)	528	WP_004909624.1	pilus assembly protein PilP	Machinery gene
Q4617_RS01695 (Q4617_01695)	pilQ	357711..359849 (+)	2139	WP_171293826.1	type IV pilus secretin PilQ	Machinery gene
Q4617_RS01700 (Q4617_01700)	aroK	359869..360429 (+)	561	WP_112986741.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39046.77 Da
• Isoelectric Point: 4.5976

>NTDB_id=862539 Q4617_RS01675 WP_004951546.1 354683..355741(+) (pilM) [Acinetobacter junii strain SC22]
MLRLYRKPNKGLVGVDISSTTVKLLELSVKNGRYWVESYALMPLPENSVVEKSILNPEAVGDALERVVNLANPHTTNVAI
AVPTSMVINKIIEMDADMTDDEREVQIRMDAEQYIPFPLDEVSLDFEVLADRLANPNRVNVLLVATRTENVDSRVEVLEL
AGLKAKIAEVESYAMERAFSVFADTLPMGANTVGILDIGHTMTTLSVMQKGKIIYTREQVFGGKQLTQDVQNRYGLSFEE
AGRAKKERSLPDDYDTEVLEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=862539 Q4617_RS01675 WP_004951546.1 354683..355741(+) (pilM) [Acinetobacter junii strain SC22]
GTGCTCAGGTTATATCGTAAACCAAATAAGGGGTTAGTGGGTGTCGATATTAGTTCGACAACTGTTAAGTTATTGGAACT
CTCTGTTAAGAACGGTCGATATTGGGTTGAAAGTTATGCATTGATGCCACTACCTGAAAATAGTGTGGTTGAGAAAAGCA
TTTTAAACCCAGAAGCAGTTGGCGACGCGCTTGAACGAGTTGTTAATCTTGCAAACCCTCACACTACCAATGTGGCTATT
GCCGTGCCTACTTCGATGGTCATTAATAAGATCATCGAGATGGATGCTGACATGACGGATGATGAGCGGGAAGTTCAAAT
TCGTATGGATGCAGAGCAATATATTCCATTCCCATTAGATGAAGTTAGTTTGGACTTTGAAGTCTTAGCTGATCGATTGG
CAAATCCTAATCGTGTCAATGTGTTATTAGTCGCTACGCGTACTGAGAATGTCGATTCACGTGTTGAAGTTCTTGAGTTA
GCAGGTCTAAAGGCAAAGATTGCTGAAGTCGAAAGCTATGCGATGGAACGTGCTTTTAGTGTATTCGCTGATACGCTACC
TATGGGTGCGAATACAGTGGGTATTCTAGATATTGGGCATACGATGACGACGTTATCGGTCATGCAAAAAGGTAAAATTA
TCTATACTCGTGAGCAAGTGTTTGGTGGAAAACAACTTACTCAAGACGTTCAAAATCGCTATGGTTTATCTTTTGAAGAA
GCTGGTCGAGCTAAAAAAGAAAGAAGTTTGCCAGATGATTACGATACCGAAGTTTTAGAACCGTTTCTTGATGCAGTTGT
GCAACAAGCTGCACGTTCGCTGCAATTCTTTTTCTCATCATCTCAATTTAATGAGATTGACCACATCCTGTTAGCAGGTG
GTAATGCCAATATTCCAGGTCTAGCTAAACTGTTGCAACAAAAGCTAGGTTATCGAGTAACGATTGCCAACCCATTTTTA
CAAATGGGCTTTTCTCCCCAAATCGATATCAAAAAAATAGAAAATGATGCCTCATCCTTGATGGTGGCATGTGGATTAGC
ATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	88.352	100	0.884
comM	Acinetobacter nosocomialis M2	88.068	100	0.881
comM	Acinetobacter baylyi ADP1	83.523	100	0.835
pilM	Legionella pneumophila strain ERS1305867	41.525	100	0.418