Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilP   Type   Machinery gene
Locus tag   Q4617_RS01690 Genome accession   NZ_CP131470
Coordinates   357122..357649 (+) Length   175 a.a.
NCBI ID   WP_004909624.1    Uniprot ID   S7WVB7
Organism   Acinetobacter junii strain SC22     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 352122..362649
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q4617_RS01675 (Q4617_01675) pilM 354683..355741 (+) 1059 WP_004951546.1 pilus assembly protein PilM Machinery gene
  Q4617_RS01680 (Q4617_01680) pilN 355741..356385 (+) 645 WP_004909633.1 PilN domain-containing protein Machinery gene
  Q4617_RS01685 (Q4617_01685) pilO 356382..357122 (+) 741 WP_075696026.1 type 4a pilus biogenesis protein PilO Machinery gene
  Q4617_RS01690 (Q4617_01690) pilP 357122..357649 (+) 528 WP_004909624.1 pilus assembly protein PilP Machinery gene
  Q4617_RS01695 (Q4617_01695) pilQ 357711..359849 (+) 2139 WP_171293826.1 type IV pilus secretin PilQ Machinery gene
  Q4617_RS01700 (Q4617_01700) aroK 359869..360429 (+) 561 WP_112986741.1 shikimate kinase AroK -
  Q4617_RS01705 (Q4617_01705) aroB 360450..361532 (+) 1083 WP_112986742.1 3-dehydroquinate synthase -
  Q4617_RS01710 (Q4617_01710) - 361549..362427 (+) 879 WP_112986743.1 hypothetical protein -

Sequence

Protein


Download         Length: 175 a.a.        Molecular weight: 19460.68 Da        Isoelectric Point: 9.3195

>NTDB_id=862542 Q4617_RS01690 WP_004909624.1 357122..357649(+) (pilP) [Acinetobacter junii strain SC22]
MNNYKLLFSFMAGLVLVGCDSKIDAVNQKMAEIRNEPALPIEPAPVFSPVPLFNYSAHQLKSPFMPSSLAAELKIMAGKR
VYPNFNRQPQPLESYALESLNMKGSMRGKTNETIALIQTPDRQIERVQVGNYLGMNQGRVVKISPTQIDLVEIVPDGRDG
YVERPRTLVLIGMAP

Nucleotide


Download         Length: 528 bp        

>NTDB_id=862542 Q4617_RS01690 WP_004909624.1 357122..357649(+) (pilP) [Acinetobacter junii strain SC22]
ATGAATAATTATAAATTATTGTTTAGTTTTATGGCCGGGCTTGTTTTGGTTGGATGTGATTCAAAAATTGACGCTGTAAA
CCAAAAAATGGCTGAAATTCGGAATGAACCTGCTTTACCTATTGAGCCAGCACCGGTATTTAGCCCTGTACCATTATTTA
ACTATTCAGCACATCAATTGAAAAGTCCATTTATGCCAAGCTCATTGGCAGCTGAGTTGAAAATAATGGCGGGTAAACGT
GTTTATCCAAATTTCAATCGTCAACCACAACCACTGGAAAGTTATGCGTTGGAATCCCTAAATATGAAGGGTAGCATGCG
TGGTAAAACGAATGAAACGATAGCGCTGATTCAGACCCCGGACCGACAAATTGAGCGGGTGCAGGTTGGAAACTACTTAG
GAATGAATCAAGGTCGAGTGGTAAAAATTAGTCCGACTCAGATTGATTTGGTGGAAATTGTACCAGATGGGCGTGATGGT
TATGTGGAGAGACCAAGAACACTCGTTCTAATTGGTATGGCACCATAA

Domains

Predicted by InterproScan.

Pilus assembly protein, PilP (PilP)

(27-170)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB S7WVB7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilP Acinetobacter baumannii D1279779

79.532

97.714

0.777
  comL Acinetobacter baylyi ADP1

70.286

100

0.703