Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   Q2U85_RS19815 Genome accession   NZ_CP130335
Coordinates   3873036..3874274 (-) Length   412 a.a.
NCBI ID   WP_144501841.1    Uniprot ID   -
Organism   Bacillus cereus strain DW444     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 3868036..3879274
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q2U85_RS19790 (Q2U85_19790) spoVS 3868120..3868380 (-) 261 WP_000404341.1 stage V sporulation protein SpoVS -
  Q2U85_RS19795 (Q2U85_19795) - 3868530..3869324 (-) 795 WP_001221095.1 TIGR00282 family metallophosphoesterase -
  Q2U85_RS19800 (Q2U85_19800) rny 3869487..3871052 (-) 1566 WP_000099769.1 ribonuclease Y -
  Q2U85_RS19805 (Q2U85_19805) - 3871534..3871956 (-) 423 Protein_3850 DNA recombination/repair protein RecA -
  Q2U85_RS19810 (Q2U85_19810) recA 3872284..3872892 (-) 609 Protein_3851 recombinase RecA -
  Q2U85_RS19815 (Q2U85_19815) cinA 3873036..3874274 (-) 1239 WP_144501841.1 competence/damage-inducible protein A Machinery gene
  Q2U85_RS19820 (Q2U85_19820) pgsA 3874295..3874873 (-) 579 WP_001052967.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  Q2U85_RS19825 (Q2U85_19825) - 3874938..3875849 (-) 912 WP_258113105.1 helix-turn-helix domain-containing protein -
  Q2U85_RS19830 (Q2U85_19830) - 3875871..3876656 (-) 786 WP_000574107.1 DUF3388 domain-containing protein -
  Q2U85_RS19835 (Q2U85_19835) - 3876795..3877043 (-) 249 WP_000114450.1 DUF3243 domain-containing protein -
  Q2U85_RS19840 (Q2U85_19840) - 3877119..3877832 (-) 714 WP_153587726.1 SDR family oxidoreductase -
  Q2U85_RS19845 (Q2U85_19845) - 3877933..3879219 (-) 1287 WP_086410213.1 pitrilysin family protein -

Sequence

Protein


Download         Length: 412 a.a.        Molecular weight: 45492.84 Da        Isoelectric Point: 5.5024

>NTDB_id=858001 Q2U85_RS19815 WP_144501841.1 3873036..3874274(-) (cinA) [Bacillus cereus strain DW444]
MNAEIIAVGTELLLGQIANTNAQFLSEKLASIGINVYYHTVVGDNNKRLQKAIEAAEERADILIFTGGLGPTKDDLTKET
IAASLDEELVYDEKALALISNYFKRTGREFTENNKKQALVLNGATVFANNHGMAPGMGVNKNGKVYILLPGPPKEMKPMY
VSYVEPFLRNFTTGENIYSRVLRFFGIGESQLEVKVQDLIDGQTNPTIAPLANDGEVTLRLTAKHQNVSEAEKLIQHVED
LILERVGEFFYGYDQEFLHYKAIELLKRKGLTLACAESLTGGLFGNQVTENAGVSSVFKGGVICYHNDVKQHVLRVPEEV
LHTDGAVSKECARYLAENVKDVLKADIGISFTGVAGPDASEQKEPGTVFVGLSVKDEPTVVFPLNLSGSRQQIRERTVKY
GFYHLYKKLEEI

Nucleotide


Download         Length: 1239 bp        

>NTDB_id=858001 Q2U85_RS19815 WP_144501841.1 3873036..3874274(-) (cinA) [Bacillus cereus strain DW444]
ATGAATGCTGAGATTATTGCGGTTGGAACTGAATTATTACTTGGACAAATTGCAAATACAAATGCCCAGTTTTTATCTGA
AAAGTTAGCTTCAATCGGAATTAACGTGTACTATCATACTGTTGTTGGTGATAATAATAAGCGACTGCAAAAGGCGATTG
AAGCTGCGGAAGAACGTGCTGATATACTTATTTTTACAGGTGGCTTAGGACCGACAAAAGATGATTTAACGAAAGAAACG
ATAGCTGCTAGTTTAGATGAAGAGCTTGTGTATGATGAAAAGGCATTAGCCTTAATAAGTAATTACTTTAAGCGTACAGG
CCGTGAATTTACGGAGAATAATAAAAAGCAAGCGCTCGTTTTAAATGGAGCAACAGTATTTGCAAATAACCACGGTATGG
CGCCAGGTATGGGGGTAAATAAGAACGGAAAAGTTTATATTTTATTACCAGGGCCGCCAAAAGAAATGAAACCAATGTAT
GTAAGTTACGTAGAGCCTTTTTTACGTAATTTTACAACAGGAGAAAACATTTATTCTCGTGTGCTTCGTTTCTTTGGTAT
TGGGGAGTCCCAATTAGAGGTGAAAGTGCAAGATTTAATTGATGGACAAACAAACCCAACAATTGCCCCGTTAGCAAATG
ATGGAGAAGTGACATTACGTTTAACCGCTAAGCATCAAAATGTTAGCGAAGCGGAGAAACTAATTCAACATGTGGAAGAT
TTGATTTTAGAAAGAGTAGGAGAATTTTTCTACGGATATGACCAAGAATTTTTGCATTATAAGGCAATCGAGTTATTGAA
GAGAAAAGGGTTAACTTTAGCGTGTGCAGAAAGTTTAACAGGTGGTCTTTTTGGAAATCAAGTAACTGAAAACGCTGGTG
TTTCTTCTGTATTTAAAGGCGGTGTCATTTGTTATCATAATGATGTGAAGCAACATGTTTTACGTGTGCCTGAAGAAGTA
TTGCATACTGATGGTGCAGTTAGTAAAGAATGTGCTCGTTATCTTGCTGAAAATGTTAAGGATGTATTAAAAGCGGATAT
CGGAATTAGTTTCACTGGGGTAGCAGGGCCAGATGCTTCAGAACAGAAAGAACCAGGAACAGTATTTGTTGGGCTTTCGG
TTAAGGATGAGCCAACTGTAGTCTTTCCTCTTAATTTAAGCGGAAGTCGTCAACAAATTAGAGAACGAACAGTAAAATAT
GGATTTTATCATTTATATAAAAAGCTAGAAGAGATATAA

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(258-408)

Damage-inducible protein CinA KH domain (CinA_KH)

(179-252)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

58.01

100

0.58
  cinA Streptococcus pneumoniae TIGR4

47.017

100

0.478
  cinA Streptococcus mitis SK321

46.778

100

0.476
  cinA Streptococcus pneumoniae Rx1

46.539

100

0.473
  cinA Streptococcus pneumoniae R6

46.539

100

0.473
  cinA Streptococcus pneumoniae D39

46.301

100

0.471
  cinA Streptococcus mitis NCTC 12261

46.301

100

0.471
  cinA Streptococcus mutans UA159

45.567

98.544

0.449
  cinA Streptococcus suis isolate S10

40.318

91.505

0.369