Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   QWV57_RS06185 Genome accession   NZ_CP129217
Coordinates   1194581..1195825 (+) Length   414 a.a.
NCBI ID   WP_015374449.1    Uniprot ID   L7ZXH3
Organism   Geobacillus zalihae strain JS1-2     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1189581..1200825
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QWV57_RS06155 (QWV57_06155) - 1189680..1190969 (+) 1290 WP_015374445.1 pitrilysin family protein -
  QWV57_RS06160 (QWV57_06160) - 1191024..1191740 (+) 717 WP_015374446.1 SDR family oxidoreductase -
  QWV57_RS06165 (QWV57_06165) - 1191803..1192051 (+) 249 WP_011230790.1 DUF3243 domain-containing protein -
  QWV57_RS06170 (QWV57_06170) - 1192183..1192974 (+) 792 WP_015374447.1 DUF3388 domain-containing protein -
  QWV57_RS06175 (QWV57_06175) - 1193002..1193895 (+) 894 WP_060788131.1 RodZ domain-containing protein -
  QWV57_RS06180 (QWV57_06180) pgsA 1193976..1194554 (+) 579 WP_011230793.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  QWV57_RS06185 (QWV57_06185) cinA 1194581..1195825 (+) 1245 WP_015374449.1 competence/damage-inducible protein A Machinery gene
  QWV57_RS06190 (QWV57_06190) - 1196003..1196290 (+) 288 Protein_1162 DNA recombination/repair protein RecA -
  QWV57_RS06195 (QWV57_06195) - 1197255..1197398 (+) 144 Protein_1163 recombinase RecA -
  QWV57_RS06200 (QWV57_06200) - 1198109..1200016 (+) 1908 WP_301101380.1 reverse transcriptase domain-containing protein -

Sequence

Protein


Download         Length: 414 a.a.        Molecular weight: 44800.53 Da        Isoelectric Point: 6.0113

>NTDB_id=851609 QWV57_RS06185 WP_015374449.1 1194581..1195825(+) (cinA) [Geobacillus zalihae strain JS1-2]
MNAEIIAVGSELLLGQIANTNAQFLSQQLAMLGINVYFHTVVGDNAGRLEQAVKTAQTRANLIIFTGGLGPTKDDLTKET
IARLLGRRLVIDEEALRAIEAYFARTNRPMTENNKKQALVLEGSTVLKNEHGMAPGMALVADGITYMLLPGPPKEMRPMF
KKYGNAFLRRTFSLSERIESRVLRFFGIGESALETAIADLIDAQSNPTIAPLAGDGEVTLRLTAKHQDEAEAKRLLDEVE
AAILARVGRHCYGYNDETLFTKTLERLKERGWTIASAESLTGGLFLEQLTAIPGASQVVQGGVVCYTNGVKEQVLGIPRT
LLEAEGAVSEPCARLLAENVRAMCDADIGISFTGVAGPDPLEGHPPGTVYIGIAVRGRDATVHRLTLSGTRDAIRIRTAK
YGCFFLLEMLAADC

Nucleotide


Download         Length: 1245 bp        

>NTDB_id=851609 QWV57_RS06185 WP_015374449.1 1194581..1195825(+) (cinA) [Geobacillus zalihae strain JS1-2]
TTGAACGCGGAGATCATTGCCGTTGGCTCCGAGCTGTTGCTTGGGCAAATCGCCAATACGAACGCCCAGTTTTTGTCGCA
GCAGCTGGCGATGCTTGGCATTAACGTCTATTTCCATACCGTCGTCGGCGACAACGCCGGCCGCCTCGAACAGGCGGTGA
AAACGGCGCAAACGAGAGCGAACCTCATCATTTTCACCGGCGGCCTCGGCCCGACGAAAGACGATTTAACGAAGGAGACG
ATCGCCCGTTTGCTTGGCCGCCGACTCGTGATCGACGAGGAAGCGCTCCGAGCGATTGAGGCGTATTTTGCCCGCACAAA
CCGGCCGATGACAGAAAACAATAAAAAGCAGGCGCTCGTCTTGGAAGGATCGACGGTGCTGAAAAACGAGCACGGCATGG
CGCCAGGGATGGCGCTTGTGGCAGACGGCATTACGTACATGTTGCTGCCCGGGCCGCCGAAAGAAATGCGGCCGATGTTC
AAAAAATACGGAAACGCCTTTTTGCGCCGTACGTTTTCGCTTTCCGAGCGCATCGAGTCGCGCGTGCTCCGCTTTTTTGG
CATCGGTGAATCAGCGCTCGAGACGGCGATTGCGGATTTGATCGACGCCCAGTCGAATCCGACGATCGCGCCGCTGGCCG
GCGACGGTGAAGTGACGCTTCGTCTGACAGCGAAGCATCAGGATGAGGCGGAGGCGAAGCGGCTTCTTGACGAAGTGGAA
GCGGCCATTTTGGCGCGCGTCGGCCGCCACTGCTACGGATATAACGATGAAACGTTGTTTACAAAGACGCTCGAGCGGTT
AAAAGAAAGAGGATGGACGATCGCGTCGGCCGAAAGTTTGACCGGCGGCCTTTTCCTCGAACAGCTCACCGCCATCCCCG
GCGCGTCTCAAGTCGTGCAGGGCGGTGTCGTCTGCTACACAAACGGCGTCAAAGAACAGGTGCTTGGCATACCGCGCACG
CTGCTTGAGGCAGAAGGGGCGGTGAGCGAGCCGTGCGCCCGTTTGCTTGCTGAAAACGTCCGCGCGATGTGCGATGCGGA
TATCGGCATCAGCTTCACCGGCGTCGCCGGACCCGATCCGCTTGAGGGCCACCCGCCCGGCACCGTGTATATCGGCATCG
CCGTCCGCGGGCGCGATGCAACTGTCCACCGTCTGACGCTGTCCGGCACGCGTGATGCCATTCGCATCCGCACCGCCAAA
TACGGCTGTTTTTTTCTGCTTGAGATGCTCGCGGCCGACTGCTGA

Domains

Predicted by InterproScan.

Probable molybdopterin binding domain (MoCF_biosynth)

(5-167)

Competence-damaged protein (CinA)

(258-409)

Damage-inducible protein CinA KH domain (CinA_KH)

(180-253)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB L7ZXH3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

59.902

98.792

0.592
  cinA Streptococcus mitis SK321

50.653

92.512

0.469
  cinA Streptococcus mitis NCTC 12261

50.653

92.512

0.469
  cinA Streptococcus pneumoniae TIGR4

50.392

92.512

0.466
  cinA Streptococcus pneumoniae Rx1

50.392

92.512

0.466
  cinA Streptococcus pneumoniae R6

50.392

92.512

0.466
  cinA Streptococcus pneumoniae D39

50.131

92.512

0.464
  cinA Streptococcus mutans UA159

47.87

96.377

0.461
  cinA Streptococcus suis isolate S10

42.593

91.304

0.389