Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   QRY64_RS21555 Genome accession   NZ_CP128152
Coordinates   3716710..3717948 (-) Length   412 a.a.
NCBI ID   WP_071758853.1    Uniprot ID   A0A1J9T0W3
Organism   Bacillus albus strain SXL388     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 3711710..3722948
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRY64_RS21535 (QRY64_21520) spoVS 3712119..3712379 (-) 261 WP_000404341.1 stage V sporulation protein SpoVS -
  QRY64_RS21540 (QRY64_21525) - 3712529..3713323 (-) 795 WP_048530450.1 TIGR00282 family metallophosphoesterase -
  QRY64_RS21545 (QRY64_21530) rny 3713488..3715053 (-) 1566 WP_000099355.1 ribonuclease Y -
  QRY64_RS21550 (QRY64_21535) recA 3715536..3716567 (-) 1032 WP_048530451.1 recombinase RecA Machinery gene
  QRY64_RS21555 (QRY64_21540) cinA 3716710..3717948 (-) 1239 WP_071758853.1 competence/damage-inducible protein CinA Machinery gene
  QRY64_RS21560 (QRY64_21545) pgsA 3717969..3718547 (-) 579 WP_001052973.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  QRY64_RS21565 (QRY64_21550) - 3718611..3719537 (-) 927 WP_048530456.1 helix-turn-helix domain-containing protein -
  QRY64_RS21570 (QRY64_21555) - 3719559..3720344 (-) 786 WP_000574107.1 DUF3388 domain-containing protein -
  QRY64_RS21575 (QRY64_21560) - 3720484..3720732 (-) 249 WP_048530457.1 DUF3243 domain-containing protein -
  QRY64_RS21580 (QRY64_21565) - 3720808..3721521 (-) 714 WP_048530458.1 SDR family oxidoreductase -
  QRY64_RS21585 (QRY64_21570) - 3721625..3722911 (-) 1287 WP_071758852.1 pitrilysin family protein -

Sequence

Protein


Download         Length: 412 a.a.        Molecular weight: 45309.52 Da        Isoelectric Point: 5.4538

>NTDB_id=846300 QRY64_RS21555 WP_071758853.1 3716710..3717948(-) (cinA) [Bacillus albus strain SXL388]
MNAEIIAVGTELLLGQIANTNAQFLSEKLASIGINVYYHTVVGDNNNRLQQAIEVAEERADMLIFTGGLGPTKDDLTKET
IASSLGEELVYDEKALASISDYFKRTGREFTENNKKQALVLNGATVFANDHGMAPGMGLNKNGKVYILLPGPPKEMKPMY
VSYVEPFLRNFTTGENIYSRVLRFFGIGESQLEVKVQDLIDGQTNPTIAPLANDGEVTLRLTAKHQSVHEAQKLIQHTED
LILERVGEFFYGYDQEFLHNKAIELLKKKGLTLACAESLTGGLFGNQVTESAGVSSVFKGGVICYHNDVKQHVLHVPEEV
LATDGAVSQECARYLAENVRGLLKADIGVSFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFLLHLSGSRQQIRERSVKY
GFYHLYKKLEEI

Nucleotide


Download         Length: 1239 bp        

>NTDB_id=846300 QRY64_RS21555 WP_071758853.1 3716710..3717948(-) (cinA) [Bacillus albus strain SXL388]
ATGAATGCTGAAATTATTGCGGTTGGAACAGAATTGTTACTTGGACAAATTGCAAATACAAACGCCCAGTTTTTATCTGA
AAAGTTAGCTTCAATTGGGATTAACGTGTACTACCATACTGTAGTTGGGGATAATAACAATCGATTACAGCAGGCGATTG
AAGTTGCAGAAGAGCGCGCGGACATGCTTATTTTTACAGGTGGATTAGGACCGACAAAAGATGATTTGACGAAGGAAACA
ATAGCGTCTAGCTTAGGGGAAGAGCTTGTATATGATGAAAAGGCATTAGCATCAATAAGCGATTACTTTAAGCGTACAGG
TCGCGAATTCACGGAGAATAACAAAAAGCAGGCGCTCGTTTTAAATGGAGCAACTGTATTTGCGAATGATCACGGCATGG
CGCCTGGTATGGGGTTAAATAAGAATGGAAAAGTTTATATTTTATTACCAGGACCACCGAAAGAAATGAAGCCGATGTAT
GTAAGTTATGTAGAGCCCTTTTTACGTAACTTTACAACAGGAGAAAACATTTATTCTCGTGTGCTTCGCTTCTTCGGGAT
TGGGGAATCTCAATTAGAAGTGAAAGTTCAAGATTTGATTGATGGACAAACGAACCCGACAATTGCCCCGCTTGCGAATG
ATGGAGAAGTGACATTACGTTTAACTGCTAAGCATCAAAGTGTTCATGAAGCGCAGAAACTCATTCAGCATACGGAAGAT
TTGATTTTAGAAAGAGTAGGAGAATTTTTCTACGGATATGATCAAGAGTTTCTTCATAATAAGGCGATAGAGTTATTGAA
GAAAAAAGGATTAACTTTAGCGTGTGCAGAAAGTTTAACGGGTGGTCTCTTCGGGAATCAAGTAACAGAAAGTGCTGGTG
TGTCTTCCGTATTTAAAGGTGGTGTCATTTGCTATCATAATGATGTGAAGCAGCATGTTCTACATGTACCTGAGGAAGTG
TTGGCTACTGACGGTGCCGTTAGTCAAGAATGTGCTCGTTATCTTGCTGAAAATGTTAGAGGATTATTAAAAGCGGATAT
CGGAGTTAGTTTCACTGGGGTAGCAGGACCAGATGCTTCAGAACATAAAGAGCCGGGAACAGTATTTGTTGGACTGGCGA
TTAAAGATGAACCAACTGTAGTCTTCCTTCTTCATTTAAGCGGAAGTCGTCAACAAATTAGAGAACGCTCAGTAAAATAT
GGATTTTATCATTTGTATAAAAAGCTAGAAGAGATATAA

Domains

Predicted by InterproScan.

Damage-inducible protein CinA KH domain (CinA_KH)

(179-252)

Competence-damaged protein (CinA)

(257-408)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1J9T0W3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

58.738

100

0.587
  cinA Streptococcus mitis SK321

47.733

100

0.485
  cinA Streptococcus pneumoniae TIGR4

47.494

100

0.483
  cinA Streptococcus mitis NCTC 12261

47.017

100

0.478
  cinA Streptococcus pneumoniae Rx1

47.017

100

0.478
  cinA Streptococcus pneumoniae R6

47.017

100

0.478
  cinA Streptococcus pneumoniae D39

46.778

100

0.476
  cinA Streptococcus mutans UA159

45.813

98.544

0.451
  cinA Streptococcus suis isolate S10

42.063

91.748

0.386