Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   QRY07_RS18805 Genome accession   NZ_CP128107
Coordinates   3542508..3543746 (-) Length   412 a.a.
NCBI ID   WP_002199555.1    Uniprot ID   J8B7H9
Organism   Bacillus cereus strain D5_B_69     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 3537508..3548746
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRY07_RS18785 (QRY07_18790) spoVS 3537826..3538086 (-) 261 WP_000404341.1 stage V sporulation protein SpoVS -
  QRY07_RS18790 (QRY07_18795) - 3538236..3539030 (-) 795 WP_002014601.1 TIGR00282 family metallophosphoesterase -
  QRY07_RS18795 (QRY07_18800) rny 3539287..3540849 (-) 1563 WP_002111330.1 ribonuclease Y -
  QRY07_RS18800 (QRY07_18805) recA 3541333..3542364 (-) 1032 WP_002014599.1 recombinase RecA Machinery gene
  QRY07_RS18805 (QRY07_18810) cinA 3542508..3543746 (-) 1239 WP_002199555.1 competence/damage-inducible protein A Machinery gene
  QRY07_RS18810 (QRY07_18815) pgsA 3543767..3544345 (-) 579 WP_002199554.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  QRY07_RS18815 (QRY07_18820) - 3544409..3545320 (-) 912 WP_002199553.1 RodZ domain-containing protein -
  QRY07_RS18820 (QRY07_18825) - 3545342..3546127 (-) 786 WP_000574107.1 DUF3388 domain-containing protein -
  QRY07_RS18825 (QRY07_18830) - 3546267..3546515 (-) 249 WP_000114449.1 DUF3243 domain-containing protein -
  QRY07_RS18830 (QRY07_18835) - 3546591..3547304 (-) 714 WP_002111338.1 SDR family oxidoreductase -
  QRY07_RS18835 (QRY07_18840) - 3547421..3548707 (-) 1287 WP_002111339.1 pitrilysin family protein -

Sequence

Protein


Download         Length: 412 a.a.        Molecular weight: 45506.94 Da        Isoelectric Point: 5.5040

>NTDB_id=845795 QRY07_RS18805 WP_002199555.1 3542508..3543746(-) (cinA) [Bacillus cereus strain D5_B_69]
MNAEIIAVGTELLLGQIANTNAQFLSEKLASIGINVYYHTVVGDNNKRLQKAIELAEERADMLIFTGGLGPTKDDLTKET
IASSLDEELVYDEKALTSISDYFKRTGREFTENNKKQALVLNGSTVFANDHGMAPGMGLNKNGKVYILLPGPPKEMKPMY
ISYVEPFLCKFTTGENIYSRVLRFFGIGESQLEVKVQDLIDGQTNPTIAPLANDGEVTLRLTAKHHDAAEAEKLIQHVED
LILERVGEFFYGYDQDFLHYKAIRLLKEKGLTLACAESLTGGLFGNQVTENAGVSSVFKGGVICYQNDVKQQILHVPEEV
LRTDGAVSKQCARYLAENVKKLLKADIGISFTGVAGPDASEHKEPGTVFVGLAIKEEPAVVFSLNLSGSRQQIRERSTKY
GFYHLFKKLEEI

Nucleotide


Download         Length: 1239 bp        

>NTDB_id=845795 QRY07_RS18805 WP_002199555.1 3542508..3543746(-) (cinA) [Bacillus cereus strain D5_B_69]
ATGAATGCTGAAATTATTGCGGTTGGAACGGAATTATTACTTGGACAAATTGCAAATACAAATGCCCAGTTTTTATCTGA
AAAGTTAGCTTCAATCGGAATTAACGTGTACTACCATACTGTTGTTGGGGATAATAACAAGCGATTACAGAAGGCAATTG
AATTGGCTGAAGAACGAGCTGATATGCTCATTTTTACAGGTGGATTAGGACCGACAAAAGATGATTTAACGAAAGAAACA
ATAGCGTCTAGTTTAGATGAAGAGCTTGTGTATGATGAAAAGGCATTAACATCGATAAGCGATTATTTTAAGCGTACAGG
CCGTGAATTTACGGAGAATAATAAAAAGCAGGCGCTCGTTTTAAATGGATCGACTGTATTTGCGAATGATCACGGTATGG
CGCCTGGTATGGGGTTAAATAAGAACGGAAAAGTTTATATTTTATTACCAGGACCACCAAAAGAAATGAAGCCGATGTAT
ATAAGTTACGTAGAGCCTTTTTTATGTAAGTTTACAACGGGGGAAAATATTTATTCTCGTGTTCTTCGTTTTTTCGGTAT
TGGGGAATCTCAATTAGAGGTGAAAGTTCAAGATTTAATTGATGGACAAACGAATCCAACCATTGCACCACTTGCAAATG
ATGGAGAAGTGACATTACGTTTAACTGCCAAACATCATGATGCTGCTGAGGCGGAGAAACTGATTCAGCATGTGGAAGAT
TTGATTTTAGAAAGAGTAGGAGAATTTTTCTACGGATATGACCAAGATTTCCTTCATTACAAGGCAATAAGGCTATTGAA
GGAAAAAGGGTTAACTTTAGCATGTGCAGAAAGTTTAACAGGTGGTCTTTTTGGAAATCAAGTAACAGAAAATGCTGGTG
TCTCGTCTGTATTTAAAGGCGGTGTCATTTGTTATCAAAATGATGTGAAGCAACAAATTTTACATGTACCTGAAGAAGTG
TTACGAACTGACGGCGCGGTTAGTAAGCAGTGTGCTCGTTATCTTGCTGAAAATGTAAAGAAACTGTTAAAAGCAGATAT
CGGGATTAGTTTCACTGGGGTGGCAGGACCGGACGCTTCAGAGCATAAAGAGCCAGGAACAGTATTTGTTGGATTGGCGA
TTAAAGAGGAACCAGCTGTAGTCTTCTCGCTTAATTTAAGTGGAAGTCGTCAACAAATTAGAGAACGCTCTACAAAATAT
GGATTTTATCATTTATTTAAAAAGCTAGAAGAGATATAA

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(259-408)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-168)

Damage-inducible protein CinA KH domain (CinA_KH)

(179-252)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB J8B7H9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

59.466

100

0.595
  cinA Streptococcus mitis SK321

46.301

100

0.471
  cinA Streptococcus pneumoniae TIGR4

45.823

100

0.466
  cinA Streptococcus mitis NCTC 12261

45.585

100

0.464
  cinA Streptococcus pneumoniae Rx1

45.346

100

0.461
  cinA Streptococcus pneumoniae R6

45.346

100

0.461
  cinA Streptococcus pneumoniae D39

45.107

100

0.459
  cinA Streptococcus mutans UA159

46.305

98.544

0.456
  cinA Streptococcus suis isolate S10

41.379

91.505

0.379