Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   V2176_RS18860 Genome accession   NZ_CP143963
Coordinates   3618110..3618799 (+) Length   229 a.a.
NCBI ID   WP_003186410.1    Uniprot ID   -
Organism   Bacillus licheniformis strain FUA2151     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3613110..3623799
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V2176_RS18840 (V2176_18840) aspA 3613786..3615213 (-) 1428 WP_003186403.1 aspartate ammonia-lyase -
  V2176_RS18845 (V2176_18845) - 3615234..3616223 (-) 990 WP_061565867.1 asparaginase -
  V2176_RS18850 (V2176_18850) - 3616439..3616786 (+) 348 WP_009329867.1 helix-turn-helix domain-containing protein -
  V2176_RS18855 (V2176_18855) - 3616867..3617913 (-) 1047 WP_009329868.1 lactonase family protein -
  V2176_RS18860 (V2176_18860) braR 3618110..3618799 (+) 690 WP_003186410.1 response regulator transcription factor Regulator
  V2176_RS18865 (V2176_18865) - 3618796..3619776 (+) 981 WP_330937982.1 sensor histidine kinase -
  V2176_RS18870 (V2176_18870) - 3620059..3620835 (+) 777 WP_003186414.1 ABC transporter ATP-binding protein -
  V2176_RS18875 (V2176_18875) - 3620810..3622687 (+) 1878 WP_003186416.1 FtsX-like permease family protein -
  V2176_RS18880 (V2176_18880) - 3622694..3623044 (+) 351 WP_017474095.1 YxeA family protein -
  V2176_RS18885 (V2176_18885) - 3623160..3623330 (+) 171 WP_017474096.1 hypothetical protein -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26825.77 Da        Isoelectric Point: 5.1276

>NTDB_id=845791 V2176_RS18860 WP_003186410.1 3618110..3618799(+) (braR) [Bacillus licheniformis strain FUA2151]
MTKIMIVEDSEDIRKLLRDHLEKYGYETVAATDFTSILEIFLQEKPDLALLDINLPAYDGYYWCRQIRQHSTCPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYEVVLAKIKGQIRRAFGEYAVKQGEKVIEFEGVQLFVERFELHCRNEKLELSKKES
KLLEVLLERGEKVTSRDRLMEKTWETDTFVDENTLNVYITRIRKKLRSMDVPFSIESVRGEGYQLRTKS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=845791 V2176_RS18860 WP_003186410.1 3618110..3618799(+) (braR) [Bacillus licheniformis strain FUA2151]
ATGACGAAAATCATGATTGTCGAGGACAGCGAAGACATTCGGAAGCTTTTACGCGATCATTTAGAAAAATACGGATACGA
AACTGTTGCAGCGACTGATTTCACCTCTATCCTTGAAATATTTCTCCAAGAGAAGCCCGACCTGGCATTGCTTGACATCA
ATCTGCCGGCATACGACGGTTACTACTGGTGCAGGCAAATCCGCCAGCATTCGACTTGTCCGATCATTTTCATTTCGGCG
AGAAGCGGAGAAATGGATCAGGTCATGGCGATCGAAAACGGCGGCGATGATTATATAGAGAAGCCTTTTTCCTATGAGGT
GGTGCTCGCTAAAATTAAAGGCCAAATTCGCAGGGCATTTGGAGAATACGCAGTAAAACAAGGTGAAAAAGTGATTGAAT
TTGAAGGCGTCCAGCTGTTTGTCGAACGTTTTGAGCTGCACTGCCGAAATGAGAAGCTCGAGCTTTCAAAAAAGGAAAGC
AAGCTCTTGGAAGTGCTGCTTGAAAGAGGAGAAAAGGTGACAAGCAGAGACCGGTTAATGGAGAAGACATGGGAAACCGA
TACATTTGTAGATGAAAACACGCTAAATGTCTATATTACAAGGATTCGCAAAAAACTGCGAAGCATGGACGTGCCCTTCT
CAATTGAATCTGTGCGGGGCGAAGGGTATCAGCTGAGGACGAAATCATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.807

97.38

0.397
  vicR Streptococcus mutans UA159

35.319

100

0.362