Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   QRA08_RS27095 Genome accession   NZ_CP127331
Coordinates   5303131..5304369 (-) Length   412 a.a.
NCBI ID   WP_089171659.1    Uniprot ID   A0AAW5KP42
Organism   Bacillus cereus strain BC116     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 5298131..5309369
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QRA08_RS27070 (QRA08_27005) spoVS 5298212..5298472 (-) 261 WP_000404341.1 stage V sporulation protein SpoVS -
  QRA08_RS27075 (QRA08_27010) - 5298622..5299416 (-) 795 WP_001221097.1 TIGR00282 family metallophosphoesterase -
  QRA08_RS27080 (QRA08_27015) rny 5299579..5301144 (-) 1566 WP_000099769.1 ribonuclease Y -
  QRA08_RS27085 (QRA08_27020) - 5301628..5302050 (-) 423 Protein_5263 recombinase RecA -
  QRA08_RS27090 (QRA08_27025) recA 5302378..5302986 (-) 609 Protein_5264 recombinase RecA -
  QRA08_RS27095 (QRA08_27030) cinA 5303131..5304369 (-) 1239 WP_089171659.1 competence/damage-inducible protein A Machinery gene
  QRA08_RS27100 (QRA08_27035) pgsA 5304390..5304968 (-) 579 WP_001052977.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  QRA08_RS27105 (QRA08_27040) - 5305032..5305943 (-) 912 WP_000137474.1 helix-turn-helix domain-containing protein -
  QRA08_RS27110 (QRA08_27045) - 5305965..5306750 (-) 786 WP_000574107.1 DUF3388 domain-containing protein -
  QRA08_RS27115 (QRA08_27050) - 5306889..5307137 (-) 249 WP_000114444.1 DUF3243 domain-containing protein -
  QRA08_RS27120 (QRA08_27055) ymfI 5307213..5307926 (-) 714 WP_023522827.1 elongation factor P 5-aminopentanone reductase -
  QRA08_RS27125 (QRA08_27060) yfmH 5308027..5309313 (-) 1287 WP_000411277.1 EF-P 5-aminopentanol modification-associated protein YfmH -

Sequence

Protein


Download         Length: 412 a.a.        Molecular weight: 45410.78 Da        Isoelectric Point: 5.8792

>NTDB_id=843501 QRA08_RS27095 WP_089171659.1 5303131..5304369(-) (cinA) [Bacillus cereus strain BC116]
MNAEIIAVGTELLLGQIANTNAQFLSEKLASIGINVYYHTVVGDNNKRLQKAIEAAEERADILIFTGGLGPTKDDLTKET
IATSLDEKLVYDEKALALISNYFKRTGREFTENNKKQALVLNGATVFANDHGMAPGMGVNKNGKVYILLPGPPKEMKPMY
VSYVEPFLRSFTTGENIYSRVLRFFGIGESQLEVKVQDLIDGQTNPTIAPLANDGEVTLRLTAKHQNVSEAEKLIQHVED
LILERVGEFFYGYDQEFLHYKAIELLKRKGLTLACAESLTGGLFGNQVTENAGVSSVFKGGVICYHNDVKQHVLRVPEEV
LHTDGAVSKECARYLAENVKDLLKADIGISFTGVAGPDASEQKEPGTVFVGLAIKGEQTAVFPLNLSGSRQQIRERSAKY
GFYHLYKKLEEI

Nucleotide


Download         Length: 1239 bp        

>NTDB_id=843501 QRA08_RS27095 WP_089171659.1 5303131..5304369(-) (cinA) [Bacillus cereus strain BC116]
ATGAATGCTGAGATTATTGCGGTTGGAACTGAATTATTACTTGGACAAATTGCAAATACAAATGCCCAGTTTTTATCTGA
AAAGTTGGCTTCAATTGGAATTAACGTGTACTATCATACTGTTGTTGGTGATAATAATAAGCGACTGCAAAAGGCGATTG
AAGCTGCGGAAGAACGTGCTGATATCCTTATTTTTACAGGTGGGTTAGGACCGACAAAAGATGATTTAACGAAAGAAACA
ATAGCGACTAGTTTAGATGAAAAGCTTGTGTATGATGAAAAGGCATTAGCCTTAATAAGTAATTACTTTAAGCGTACAGG
CCGTGAATTTACGGAGAATAATAAAAAGCAAGCGCTCGTTTTAAATGGAGCAACAGTATTTGCAAATGACCACGGTATGG
CGCCGGGTATGGGGGTAAATAAGAACGGAAAAGTTTATATTTTATTACCAGGGCCGCCAAAAGAAATGAAACCAATGTAT
GTAAGTTACGTAGAGCCTTTTTTACGTAGTTTTACAACAGGAGAAAACATTTATTCACGTGTGCTTCGTTTCTTCGGTAT
TGGGGAGTCCCAATTAGAGGTGAAAGTTCAAGATTTAATTGATGGACAAACAAACCCAACAATTGCCCCGCTAGCAAATG
ATGGAGAAGTGACATTACGTTTAACCGCTAAGCATCAAAATGTTAGCGAAGCGGAGAAACTAATTCAACATGTGGAAGAT
TTGATTTTAGAAAGAGTAGGAGAATTTTTCTACGGATATGACCAAGAATTTTTGCATTATAAGGCAATCGAGTTATTGAA
GAGAAAAGGGTTAACTTTAGCATGTGCAGAAAGTTTAACAGGTGGTCTTTTTGGAAATCAAGTAACTGAAAATGCTGGTG
TTTCTTCTGTATTTAAGGGCGGTGTCATTTGTTATCATAATGATGTGAAGCAACATGTTTTACGTGTGCCTGAAGAAGTA
TTGCATACTGATGGTGCAGTTAGTAAGGAATGTGCTCGTTATCTTGCTGAAAATGTTAAGGATTTATTAAAAGCGGATAT
CGGAATTAGTTTCACTGGGGTAGCAGGGCCAGATGCTTCAGAACAGAAAGAGCCAGGAACAGTATTTGTTGGATTAGCGA
TTAAAGGTGAACAAACTGCAGTCTTTCCTCTTAATTTAAGTGGAAGTCGTCAACAAATTAGAGAACGATCAGCAAAATAT
GGATTTTATCATTTATATAAAAAGCTAGAAGAGATATAA

Domains

Predicted by InterproScan.

Probable molybdopterin binding domain (MoCF_biosynth)

(5-169)

Damage-inducible protein CinA KH domain (CinA_KH)

(179-252)

Competence-damaged protein (CinA)

(258-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

58.293

99.515

0.58
  cinA Streptococcus pneumoniae TIGR4

46.778

100

0.476
  cinA Streptococcus mitis SK321

46.539

100

0.473
  cinA Streptococcus pneumoniae Rx1

46.301

100

0.471
  cinA Streptococcus pneumoniae R6

46.301

100

0.471
  cinA Streptococcus pneumoniae D39

46.062

100

0.468
  cinA Streptococcus mitis NCTC 12261

46.062

100

0.468
  cinA Streptococcus mutans UA159

45.32

98.544

0.447
  cinA Streptococcus suis isolate S10

40.849

91.505

0.374