Detailed information NTG0084141

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QMG85_RS24125
• Genome accession: NZ_AP027162
• Coordinates: 4688088..4689113 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain EH031
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4683088..4694113

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMG85_RS24115 (BEL031_4638)	rpmE	4685319..4685531 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
QMG85_RS24120 (BEL031_4639)	priA	4685734..4687932 (+)	2199	WP_001341957.1	primosomal protein N'	Machinery gene
QMG85_RS24125 (BEL031_4640)	cytR	4688088..4689113 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
QMG85_RS24130 (BEL031_4641)	ftsN	4689205..4690164 (+)	960	WP_000068834.1	cell division protein FtsN	-
QMG85_RS24135 (BEL031_4642)	hslV	4690257..4690787 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
QMG85_RS24140 (BEL031_4643)	hslU	4690797..4692128 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
QMG85_RS24145 (BEL031_4644)	menA	4692195..4693121 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QMG85_RS24150 (BEL031_4645)	rraA	4693214..4693699 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
QMG85_RS24155 (BEL031_4646)	zapB	4693784..4694029 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=84141 QMG85_RS24125 WP_000644904.1 4688088..4689113(+) (cytR) [Escherichia coli strain EH031]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=84141 QMG85_RS24125 WP_000644904.1 4688088..4689113(+) (cytR) [Escherichia coli strain EH031]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628