Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   QPL80_RS19325 Genome accession   NZ_CP126515
Coordinates   3614120..3615358 (-) Length   412 a.a.
NCBI ID   WP_088667290.1    Uniprot ID   -
Organism   Bacillus anthracis strain Mn106-1 head2 chi     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 3609120..3620358
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPL80_RS19300 (QPL80_19350) spoVS 3609204..3609464 (-) 261 WP_000404341.1 stage V sporulation protein SpoVS -
  QPL80_RS19305 (QPL80_19355) - 3609613..3610407 (-) 795 WP_001221095.1 TIGR00282 family metallophosphoesterase -
  QPL80_RS19310 (QPL80_19360) rny 3610573..3612135 (-) 1563 WP_000099773.1 ribonuclease Y -
  QPL80_RS19315 (QPL80_19365) - 3612617..3613039 (-) 423 Protein_3641 DNA recombination/repair protein RecA -
  QPL80_RS19320 (QPL80_19370) recA 3613367..3613975 (-) 609 Protein_3642 recombinase RecA -
  QPL80_RS19325 (QPL80_19375) cinA 3614120..3615358 (-) 1239 WP_088667290.1 competence/damage-inducible protein CinA Machinery gene
  QPL80_RS19330 (QPL80_19380) pgsA 3615379..3615957 (-) 579 WP_001052964.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  QPL80_RS19335 (QPL80_19385) - 3616021..3616932 (-) 912 WP_284565644.1 RodZ domain-containing protein -
  QPL80_RS19340 (QPL80_19390) - 3616954..3617739 (-) 786 WP_000574107.1 DUF3388 domain-containing protein -
  QPL80_RS19345 (QPL80_19395) - 3617879..3618127 (-) 249 WP_000114454.1 DUF3243 domain-containing protein -
  QPL80_RS19350 (QPL80_19400) - 3618203..3618916 (-) 714 WP_071727199.1 SDR family oxidoreductase -
  QPL80_RS19355 (QPL80_19405) - 3619020..3620306 (-) 1287 WP_088667288.1 pitrilysin family protein -

Sequence

Protein


Download         Length: 412 a.a.        Molecular weight: 45278.50 Da        Isoelectric Point: 5.0278

>NTDB_id=838214 QPL80_RS19325 WP_088667290.1 3614120..3615358(-) (cinA) [Bacillus anthracis strain Mn106-1 head2 chi]
MNAEIIAVGTELLLGQIANTNAQFLSEKLASIGINVYYHTVVGDNNKRLQQAIEVAEERADMLIFTGGLGPTKDDLTKET
IASSLAEELVYDEKALASISDYFKRTGREFTENNKKQALVLDGATVFANDHGMAPGMGLNKNGKVYILLPGPPKEMKPMY
VSYVEPFLRNFTTGENIYSRVLRFFGIGESQLEVKVQDLIDGQTNPTIAPLANDGEVTLRLTAKHQNVDEAEKLIQHVED
LILERVGEFFYGYDQEFLHDKAIELLKKKGLTLACAESLTGGLFGNQVTESAGVSSVFKGGVICYHNDVKQHVLHVPEEV
LSTDGAVSKGCARYLAENVKELLKADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIRERSAKY
GFYHLYKKLEEI

Nucleotide


Download         Length: 1239 bp        

>NTDB_id=838214 QPL80_RS19325 WP_088667290.1 3614120..3615358(-) (cinA) [Bacillus anthracis strain Mn106-1 head2 chi]
ATGAACGCTGAAATCATTGCGGTTGGAACAGAATTATTACTTGGACAAATTGCAAATACGAACGCCCAGTTTTTATCTGA
AAAGTTAGCTTCAATTGGAATTAACGTGTACTACCATACTGTAGTTGGTGATAATAACAAGCGACTGCAGCAGGCGATTG
AAGTTGCAGAAGAACGTGCGGATATGCTCATTTTCACAGGTGGATTAGGACCGACAAAAGATGATTTAACGAAGGAAACA
ATAGCGTCTAGCTTAGCGGAAGAGCTTGTATATGATGAAAAGGCATTAGCATCAATAAGCGATTACTTTAAGCGAACAGG
TCGAGAGTTCACGGAGAATAATAAAAAGCAGGCGCTCGTTTTGGATGGAGCAACTGTATTTGCAAATGATCACGGTATGG
CACCTGGTATGGGATTAAATAAGAACGGAAAAGTTTATATTTTATTACCAGGACCACCGAAAGAAATGAAGCCGATGTAT
GTAAGTTATGTGGAGCCTTTTTTACGTAACTTTACAACAGGAGAAAACATTTATTCTCGCGTGCTTCGCTTTTTCGGAAT
TGGGGAATCTCAATTAGAGGTGAAAGTTCAAGATTTAATTGATGGACAAACGAATCCGACAATTGCCCCGCTTGCGAATG
ATGGAGAAGTGACATTACGTTTAACTGCTAAACATCAAAATGTTGATGAAGCAGAGAAACTCATTCAGCATGTGGAAGAT
TTGATTTTAGAAAGAGTAGGAGAATTTTTCTACGGGTATGACCAAGAGTTTCTGCATGATAAGGCGATAGAGTTATTGAA
GAAAAAAGGATTAACTTTAGCGTGTGCGGAAAGTTTAACAGGTGGTCTCTTCGGTAATCAAGTAACAGAAAGTGCTGGTG
TGTCTTCCGTATTTAAAGGCGGTGTCATTTGTTATCATAATGATGTGAAGCAACATGTTTTACATGTACCTGAGGAAGTG
TTGTCTACTGATGGTGCAGTTAGTAAAGGATGTGCCCGTTATCTTGCTGAAAATGTTAAAGAATTATTAAAAGCGGATAT
CGGGATTAGTTTCACTGGGGTAGCAGGACCGGATGCTTCAGAACATAAAGAACCGGGAACAGTATTTGTTGGATTGGCGA
TTAAAGATGAACCAACTGTAGTCTTTCCTCTTAATTTAAGTGGAAGTCGCCAACAAATTAGAGAACGCTCAGCGAAATAT
GGATTTTATCATTTATATAAAAAGCTAGAAGAAATATAA

Domains

Predicted by InterproScan.

Competence-damaged protein (CinA)

(257-408)

Damage-inducible protein CinA KH domain (CinA_KH)

(179-252)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

58.738

100

0.587
  cinA Streptococcus mitis SK321

47.255

100

0.481
  cinA Streptococcus pneumoniae TIGR4

47.017

100

0.478
  cinA Streptococcus pneumoniae Rx1

46.539

100

0.473
  cinA Streptococcus pneumoniae R6

46.539

100

0.473
  cinA Streptococcus pneumoniae D39

46.301

100

0.471
  cinA Streptococcus mitis NCTC 12261

46.301

100

0.471
  cinA Streptococcus mutans UA159

45.567

98.544

0.449
  cinA Streptococcus suis isolate S10

41.27

91.748

0.379