Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   QNH23_RS07710 Genome accession   NZ_CP126113
Coordinates   1477076..1478326 (-) Length   416 a.a.
NCBI ID   WP_120069842.1    Uniprot ID   A0A443J1F7
Organism   Siminovitchia fortis strain XLM16     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 1472076..1483326
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH23_RS07685 (QNH23_07685) - 1472150..1472407 (-) 258 WP_283903070.1 hypothetical protein -
  QNH23_RS07690 (QNH23_07690) spoVS 1472713..1472973 (-) 261 WP_018705045.1 stage V sporulation protein SpoVS -
  QNH23_RS07695 (QNH23_07695) - 1473112..1473909 (-) 798 WP_120069851.1 TIGR00282 family metallophosphoesterase -
  QNH23_RS07700 (QNH23_07700) rny 1474024..1475586 (-) 1563 WP_120069848.1 ribonuclease Y -
  QNH23_RS07705 (QNH23_07705) recA 1475798..1476841 (-) 1044 WP_120069845.1 recombinase RecA Machinery gene
  QNH23_RS07710 (QNH23_07710) cinA 1477076..1478326 (-) 1251 WP_120069842.1 competence/damage-inducible protein A Machinery gene
  QNH23_RS07715 (QNH23_07715) pgsA 1478349..1478927 (-) 579 WP_120069838.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  QNH23_RS07720 (QNH23_07720) - 1479056..1479952 (-) 897 WP_235870269.1 RodZ domain-containing protein -
  QNH23_RS07725 (QNH23_07725) - 1479974..1480774 (-) 801 WP_120069835.1 DUF3388 domain-containing protein -
  QNH23_RS07730 (QNH23_07730) - 1480969..1481226 (-) 258 WP_120069833.1 DUF3243 domain-containing protein -
  QNH23_RS07735 (QNH23_07735) - 1481317..1482039 (-) 723 WP_120069830.1 SDR family oxidoreductase -

Sequence

Protein


Download         Length: 416 a.a.        Molecular weight: 45695.37 Da        Isoelectric Point: 5.0508

>NTDB_id=836543 QNH23_RS07710 WP_120069842.1 1477076..1478326(-) (cinA) [Siminovitchia fortis strain XLM16]
MKAEIIGVGTELLLGQIANTNAQYLSGELAEIGVNVYFHTVVGDNPSRLADAIKQAEKRADLLIFTGGLGPTKDDLTKEI
IAGHLQREMETDNDAWEKIQDYFKRTGRYMTANNEKQARVIIGAKVLPNEHGMAPGMFIKEGPCFYMLLPGPPHEMKPMF
RTYGRQAIIDQLETVDCIESRVLRFFNIGEAEIAERLSDIIDAQTNPTVAPLAGDGEVTIRLTARSDSKDKAVAMLNDIE
KQIQEKAGEHFYGYNDTSLMAELLKVLENRELTIAAAESLTGGLFQSEMTSVVGVSTMLLGGIVCYSNEAKVKLCDVKPE
TLEKYGAVSEQCAIELAENVRMSLNADIGISFTGAAGPDSLEGHPAGTVWIGMSFKDRESKAILAKMAGTRNGNRRRSVK
MGCYYLLKELKELDKK

Nucleotide


Download         Length: 1251 bp        

>NTDB_id=836543 QNH23_RS07710 WP_120069842.1 1477076..1478326(-) (cinA) [Siminovitchia fortis strain XLM16]
ATGAAAGCTGAAATAATCGGTGTCGGTACGGAGTTGCTGCTTGGCCAAATTGCCAATACGAATGCACAGTATCTATCCGG
GGAACTGGCAGAGATCGGTGTCAACGTTTATTTCCATACTGTCGTCGGCGATAATCCAAGCCGGCTGGCAGATGCTATAA
AGCAGGCGGAAAAAAGGGCTGATCTGTTAATTTTCACAGGCGGATTGGGCCCCACAAAAGATGATCTCACAAAGGAAATC
ATTGCGGGCCATTTGCAGCGGGAAATGGAAACAGACAATGATGCCTGGGAAAAAATCCAGGATTACTTCAAGAGGACCGG
CCGGTATATGACAGCCAACAACGAAAAACAGGCCCGTGTCATCATAGGGGCAAAAGTGCTCCCGAATGAGCATGGGATGG
CACCAGGCATGTTTATAAAAGAAGGTCCATGCTTTTATATGCTGCTTCCGGGTCCGCCCCACGAAATGAAGCCGATGTTC
AGAACATACGGCAGACAGGCGATCATTGATCAATTGGAAACGGTGGACTGCATAGAATCAAGGGTGCTTCGTTTCTTTAA
TATCGGAGAGGCGGAAATTGCTGAAAGATTATCCGATATCATTGATGCCCAAACGAACCCTACTGTAGCCCCTTTAGCGG
GAGATGGGGAAGTGACAATCCGGTTGACCGCCAGAAGCGATAGCAAAGACAAAGCCGTGGCCATGCTGAATGATATAGAA
AAGCAAATCCAAGAAAAAGCAGGAGAGCATTTTTACGGCTATAACGATACATCACTGATGGCCGAACTGTTGAAGGTGCT
GGAAAATCGCGAATTGACAATCGCAGCAGCCGAAAGCTTGACAGGCGGACTGTTCCAGTCTGAAATGACATCGGTGGTCG
GAGTCAGTACAATGCTGCTTGGAGGCATCGTCTGCTACTCGAATGAGGCAAAAGTCAAGCTGTGCGATGTAAAACCCGAG
ACGTTGGAAAAATATGGGGCGGTCAGTGAGCAGTGTGCGATAGAGCTTGCCGAAAATGTCAGAATGTCGCTTAATGCCGA
CATCGGAATAAGCTTCACCGGTGCGGCCGGGCCGGATTCGCTTGAAGGGCATCCCGCCGGGACAGTATGGATCGGCATGT
CGTTCAAAGATCGGGAATCCAAGGCGATTCTCGCAAAGATGGCAGGTACACGAAACGGAAACAGGCGGCGTTCCGTCAAA
ATGGGATGCTATTATCTATTAAAAGAGTTAAAAGAGCTAGACAAAAAATAG

Domains

Predicted by InterproScan.

Damage-inducible protein CinA KH domain (CinA_KH)

(180-253)

Competence-damaged protein (CinA)

(257-409)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-165)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A443J1F7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

53.528

98.798

0.529
  cinA Streptococcus mitis SK321

45.933

100

0.462
  cinA Streptococcus mitis NCTC 12261

45.455

100

0.457
  cinA Streptococcus pneumoniae TIGR4

45.455

100

0.457
  cinA Streptococcus pneumoniae Rx1

45.215

100

0.454
  cinA Streptococcus pneumoniae R6

45.215

100

0.454
  cinA Streptococcus pneumoniae D39

44.976

100

0.452
  cinA Streptococcus mutans UA159

42.857

99.279

0.425
  cinA Streptococcus suis isolate S10

39.842

91.106

0.363