Detailed information NTG0829529

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: SJH97_RS10980
• Genome accession: NZ_CP139175
• Coordinates: 2389934..2390641 (-)
• Length: 235 a.a.
• NCBI ID: WP_033276868.1
• Uniprot ID: A0ACC6UL44
• Organism: Streptomyces sp. CL7
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2384934..2395641

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SJH97_RS10960 (SJH97_10960)	-	2385649..2386599 (+)	951	WP_320585063.1	hypothetical protein	-
SJH97_RS10965 (SJH97_10965)	-	2386638..2387846 (-)	1209	WP_320585064.1	RNA-guided endonuclease TnpB family protein	-
SJH97_RS10970 (SJH97_10970)	tnpA	2387863..2388303 (+)	441	WP_414079758.1	IS200/IS605 family transposase	-
SJH97_RS10975 (SJH97_10975)	clpX	2388464..2389750 (-)	1287	WP_019527658.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
SJH97_RS10980 (SJH97_10980)	clpP	2389934..2390641 (-)	708	WP_033276868.1	ATP-dependent Clp protease proteolytic subunit	Regulator
SJH97_RS10985 (SJH97_10985)	-	2390750..2391355 (-)	606	WP_163080449.1	ATP-dependent Clp protease proteolytic subunit	-
SJH97_RS10990 (SJH97_10990)	tig	2391655..2393040 (-)	1386	WP_320585065.1	trigger factor	-
SJH97_RS11005 (SJH97_11005)	-	2393610..2393804 (-)	195	WP_093765730.1	hypothetical protein	-
SJH97_RS11010 (SJH97_11010)	-	2394478..2395620 (+)	1143	WP_414079828.1	acyltransferase family protein	-

Sequence

Protein

• Length: 235 a.a.
• Molecular weight: 26147.69 Da
• Isoelectric Point: 4.6559

>NTDB_id=829529 SJH97_RS10980 WP_033276868.1 2389934..2390641(-) (clpP) [Streptomyces sp. CL7]
MNAFPGSGIYDRMQAVQDMSGSQGRYTGPQAESRYVIPRFVERTSQGIREYDPYAKLFEERVIFLGVQIDDASANDVMAQ
LLCLESMDPDRDISVYINSPGGSFTALTAIYDTMQYVKPDIQTVCMGQAASAAAVLLAAGTPGKRMALPNARVLIHQPYS
ETGRGQVSDLEIAANEILRMRTQLEDMLAKHSTRPIEKIREDIERDKILTAEDALEYGLIDQIITTRKMDNSSLR

Nucleotide

• Length: 708 bp

>NTDB_id=829529 SJH97_RS10980 WP_033276868.1 2389934..2390641(-) (clpP) [Streptomyces sp. CL7]
GTGAACGCATTCCCCGGCAGCGGGATCTACGACCGTATGCAGGCCGTGCAGGACATGTCCGGCTCGCAGGGCCGTTACAC
CGGTCCGCAGGCCGAGTCCCGTTACGTCATTCCGCGCTTCGTCGAGCGCACCTCCCAGGGCATCCGCGAGTACGACCCGT
ACGCGAAGCTCTTCGAGGAGCGAGTGATCTTCCTCGGCGTGCAGATCGACGACGCCTCCGCCAACGACGTCATGGCGCAG
CTGCTGTGCCTGGAGTCGATGGACCCCGACCGGGACATCTCGGTCTACATCAACAGCCCCGGCGGCTCCTTCACCGCGCT
CACCGCGATCTACGACACGATGCAGTACGTGAAGCCGGACATCCAGACGGTGTGCATGGGCCAGGCGGCCTCCGCCGCCG
CCGTCCTGCTCGCCGCCGGCACGCCCGGCAAGCGCATGGCGCTGCCGAACGCCCGGGTGCTGATCCACCAGCCCTACAGC
GAGACCGGCCGCGGCCAGGTCTCCGACCTGGAGATCGCCGCCAACGAGATCCTCCGCATGCGCACGCAGCTGGAGGACAT
GCTGGCCAAGCACTCCACCCGTCCGATCGAGAAGATCCGCGAGGACATCGAGCGCGACAAGATCCTCACGGCCGAGGACG
CGCTGGAGTACGGCCTGATCGACCAGATCATCACCACCCGGAAGATGGACAACTCCAGCCTGCGCTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (46-226)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	52.632	80.851	0.426
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	51.596	80	0.413
clpP	Lactococcus lactis subsp. cremoris KW2	45.05	85.957	0.387
clpP	Streptococcus mutans UA159	44.39	87.234	0.387
clpP	Streptococcus thermophilus LMD-9	46.154	82.979	0.383
clpP	Streptococcus thermophilus LMG 18311	46.154	82.979	0.383
clpP	Streptococcus pyogenes JRS4	44.776	85.532	0.383
clpP	Streptococcus pyogenes MGAS315	44.776	85.532	0.383
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	44.059	85.957	0.379
clpP	Streptococcus pneumoniae Rx1	44.388	83.404	0.37
clpP	Streptococcus pneumoniae TIGR4	44.388	83.404	0.37
clpP	Streptococcus pneumoniae D39	44.388	83.404	0.37
clpP	Streptococcus pneumoniae R6	44.388	83.404	0.37