Detailed information NTG0829528

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: SJH97_RS10975
• Genome accession: NZ_CP139175
• Coordinates: 2388464..2389750 (-)
• Length: 428 a.a.
• NCBI ID: WP_019527658.1
• Uniprot ID: A0ACC6UKT1
• Organism: Streptomyces sp. CL7
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2383464..2394750

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SJH97_RS10955 (SJH97_10955)	-	2384646..2385611 (+)	966	WP_320585062.1	hypothetical protein	-
SJH97_RS10960 (SJH97_10960)	-	2385649..2386599 (+)	951	WP_320585063.1	hypothetical protein	-
SJH97_RS10965 (SJH97_10965)	-	2386638..2387846 (-)	1209	WP_320585064.1	RNA-guided endonuclease TnpB family protein	-
SJH97_RS10970 (SJH97_10970)	tnpA	2387863..2388303 (+)	441	WP_414079758.1	IS200/IS605 family transposase	-
SJH97_RS10975 (SJH97_10975)	clpX	2388464..2389750 (-)	1287	WP_019527658.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
SJH97_RS10980 (SJH97_10980)	clpP	2389934..2390641 (-)	708	WP_033276868.1	ATP-dependent Clp protease proteolytic subunit	Regulator
SJH97_RS10985 (SJH97_10985)	-	2390750..2391355 (-)	606	WP_163080449.1	ATP-dependent Clp protease proteolytic subunit	-
SJH97_RS10990 (SJH97_10990)	tig	2391655..2393040 (-)	1386	WP_320585065.1	trigger factor	-
SJH97_RS11005 (SJH97_11005)	-	2393610..2393804 (-)	195	WP_093765730.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46789.57 Da
• Isoelectric Point: 4.7360

>NTDB_id=829528 SJH97_RS10975 WP_019527658.1 2388464..2389750(-) (clpX) [Streptomyces sp. CL7]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIEGRAGAKGIGFGATIRSKREMESKDQFEEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDSRGRGSGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=829528 SJH97_RS10975 WP_019527658.1 2388464..2389750(-) (clpX) [Streptomyces sp. CL7]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACCA
GTGAGGTCCGCTGGGAGGAGCTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTGGTGGGCCAGGAGGCG
GCCAAGAAGGCCCTCTCCGTGGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGGGAGAACGGCGGCGCCCAGGGCCG
TGACGACGCCATCGAGCTGGCGAAGTCCAACATCCTGCTGCTCGGCCCCACGGGCTCCGGCAAGACCCTGCTGGCGCAGA
CCCTCGCCCGCATGCTGAACGTCCCGTTCGCGATCGCCGACGCCACGGCGCTCACCGAGGCCGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGTAAGAGCGAAAACCCGTCGATCACGCGGGACGTGAGCGGCGAGGGAGTGCAGCAGGCGC
TGCTGAAGATCCTTGAGGGCACCACCGCCTCCGTTCCGCCGCAGGGCGGGCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCGCCGGTCTGGAGAAGATCATCGAGGGCCGGGCGGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGGGAGATGGAGTCCAAGGACCAGTTCGAGGAGGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGTCTCCCCGTCATCACCAGCGTGCACAACCTCGACCGC
GAGGCGCTGCTGCAGATCCTCGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGTGAGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGGGCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACC
GCGGACGTGGTGCTCTCCAACGTCAACCCGACGCTCATCCCGCGCGACTCGCGAGGCCGCGGCTCGGGCGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.935	93.925	0.591
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.745	96.028	0.526