Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | QLQ87_RS18960 | Genome accession | NZ_CP124841 |
| Coordinates | 4062914..4063234 (-) | Length | 106 a.a. |
| NCBI ID | WP_058395953.1 | Uniprot ID | A0AAX3VTM3 |
| Organism | Aeromonas salmonicida strain 57 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4057914..4068234
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QLQ87_RS18940 (QLQ87_18940) | - | 4058194..4058892 (-) | 699 | WP_282683693.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| QLQ87_RS18945 (QLQ87_18945) | - | 4059249..4060220 (+) | 972 | WP_011898383.1 | response regulator | - |
| QLQ87_RS18950 (QLQ87_18950) | - | 4060296..4061693 (-) | 1398 | WP_017412884.1 | peptide MFS transporter | - |
| QLQ87_RS18955 (QLQ87_18955) | galU | 4061907..4062818 (-) | 912 | WP_058395952.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| QLQ87_RS18960 (QLQ87_18960) | comEA | 4062914..4063234 (-) | 321 | WP_058395953.1 | ComEA family DNA-binding protein | Machinery gene |
| QLQ87_RS18965 (QLQ87_18965) | cysQ | 4063402..4064172 (+) | 771 | WP_282683694.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| QLQ87_RS18970 (QLQ87_18970) | - | 4064254..4064550 (-) | 297 | WP_005318066.1 | YciI family protein | - |
| QLQ87_RS18975 (QLQ87_18975) | - | 4064578..4065129 (-) | 552 | WP_005318063.1 | septation protein A | - |
| QLQ87_RS18980 (QLQ87_18980) | - | 4065215..4066750 (-) | 1536 | WP_282683695.1 | pyridoxal-dependent decarboxylase | - |
| QLQ87_RS18985 (QLQ87_18985) | - | 4066975..4067610 (+) | 636 | WP_021140622.1 | hemolysin III family protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11241.11 Da Isoelectric Point: 9.6863
>NTDB_id=828327 QLQ87_RS18960 WP_058395953.1 4062914..4063234(-) (comEA) [Aeromonas salmonicida strain 57]
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVTTTKESGKVNLNTASINELTALKGIGEKKAQAIVDFREKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVTTTKESGKVNLNTASINELTALKGIGEKKAQAIVDFREKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=828327 QLQ87_RS18960 WP_058395953.1 4062914..4063234(-) (comEA) [Aeromonas salmonicida strain 57]
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGTTGAGCCAGCCTTTGCTGGCCGCCGACAA
GCCTGCAGCCAAGCCAGCAACCACGGTCACCACCACCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCTCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTGAGAAGCAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCAGCAACCCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGTTGAGCCAGCCTTTGCTGGCCGCCGACAA
GCCTGCAGCCAAGCCAGCAACCACGGTCACCACCACCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCTCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTGAGAAGCAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCAGCAACCCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae strain A1552 |
50 |
100 |
0.519 |
| comEA | Vibrio cholerae C6706 |
50 |
100 |
0.519 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
45.045 |
100 |
0.472 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
46.392 |
91.509 |
0.425 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
63.492 |
59.434 |
0.377 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
51.316 |
71.698 |
0.368 |
| comEA | Vibrio campbellii strain DS40M4 |
40.206 |
91.509 |
0.368 |
| comEA | Legionella pneumophila str. Paris |
38.235 |
96.226 |
0.368 |
| comEA | Legionella pneumophila strain ERS1305867 |
38.235 |
96.226 |
0.368 |