Detailed information NTG0828235

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: QJS65_RS17605
• Genome accession: NZ_CP124831
• Coordinates: 3365731..3366417 (-)
• Length: 228 a.a.
• NCBI ID: WP_206428014.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain Sample7_7
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3360731..3371417

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QJS65_RS17570 (QJS65_17570)	fliW	3360867..3361301 (-)	435	WP_025208061.1	flagellar assembly protein FliW	-
QJS65_RS17575 (QJS65_17575)	-	3361330..3361908 (-)	579	WP_024719238.1	DUF6470 family protein	-
QJS65_RS17580 (QJS65_17580)	flgL	3361955..3362866 (-)	912	WP_008348257.1	flagellar hook-associated protein FlgL	-
QJS65_RS17585 (QJS65_17585)	flgK	3362875..3364395 (-)	1521	WP_058336981.1	flagellar hook-associated protein FlgK	-
QJS65_RS17590 (QJS65_17590)	-	3364411..3364893 (-)	483	WP_007499977.1	flagellar protein FlgN	-
QJS65_RS17595 (QJS65_17595)	flgM	3364912..3365175 (-)	264	WP_268357970.1	flagellar biosynthesis anti-sigma factor FlgM	-
QJS65_RS17600 (QJS65_17600)	-	3365255..3365674 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
QJS65_RS17605 (QJS65_17605)	comFC	3365731..3366417 (-)	687	WP_206428014.1	ComF family protein	Machinery gene
QJS65_RS17610 (QJS65_17610)	-	3366414..3366707 (-)	294	WP_282745866.1	late competence development ComFB family protein	-
QJS65_RS17615 (QJS65_17615)	comFA	3366772..3367899 (-)	1128	WP_282745867.1	DEAD/DEAH box helicase	Machinery gene
QJS65_RS17620 (QJS65_17620)	-	3368271..3369113 (-)	843	WP_282745868.1	DegV family protein	-
QJS65_RS17625 (QJS65_17625)	degU	3369325..3370014 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
QJS65_RS17630 (QJS65_17630)	degS	3370079..3371254 (-)	1176	WP_024719243.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 26115.63 Da
• Isoelectric Point: 10.2393

>NTDB_id=828235 QJS65_RS17605 WP_206428014.1 3365731..3366417(-) (comFC) [Bacillus altitudinis strain Sample7_7]
MICPICESHFVAAFTWKSFLLLNEDRLCVACKNHLMKIQGPTCPKCGRAQSNDQLCQDCSRWNKRRDFAEILVMNRSVYA
YNDFMKDILARFKFRGDTALADLFKKDVQSAFKRSFSIKEPVLVPIPLSKERLKERGFNQSMMLASMIGGPILEPLIKVH
QSKQSKKRKNERLHQQNLFQLRQSNPIVLKDIILIDDIYTTGATVYHAAKILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 687 bp

>NTDB_id=828235 QJS65_RS17605 WP_206428014.1 3365731..3366417(-) (comFC) [Bacillus altitudinis strain Sample7_7]
TTGATTTGTCCAATTTGTGAGAGCCATTTTGTGGCTGCTTTTACATGGAAATCATTCCTACTATTAAATGAAGACCGTTT
ATGTGTAGCATGTAAGAACCACTTGATGAAGATTCAAGGTCCTACTTGTCCCAAATGCGGAAGAGCGCAATCAAATGATC
AATTGTGTCAGGATTGTTCAAGGTGGAATAAACGACGGGATTTTGCTGAGATTCTTGTAATGAATCGGTCTGTTTATGCT
TACAACGACTTTATGAAAGATATTCTAGCTCGATTTAAATTTCGAGGTGATACGGCTTTAGCTGATCTATTTAAAAAAGA
TGTACAGTCAGCGTTTAAACGTTCTTTTTCAATCAAAGAACCGGTGCTTGTCCCAATTCCTTTGAGTAAAGAGAGATTAA
AGGAAAGAGGATTCAATCAGTCAATGATGCTTGCTTCCATGATTGGCGGACCTATATTGGAGCCACTTATAAAAGTACAT
CAAAGTAAGCAGTCTAAGAAAAGAAAAAATGAACGTTTACATCAACAGAATTTGTTCCAATTAAGGCAGTCAAACCCGAT
CGTTCTAAAGGATATCATATTAATCGATGATATTTATACAACTGGGGCGACAGTCTATCATGCAGCAAAAATTTTAAAAG
ACGCAGGCGCCAAAAGTGTTTCCTCTTTTACGTTGATTCGTAGTTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (3-59)

• Phosphoribosyl transferase domain (Pribosyltran) (161-226)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	49.565	100	0.5
comFC/cflB	Streptococcus mitis SK321	38.428	100	0.386
comFC/cflB	Streptococcus mitis NCTC 12261	37.991	100	0.382
comFC/cflB	Streptococcus pneumoniae R6	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae TIGR4	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae Rx1	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae D39	37.118	100	0.373