Detailed information NTG0828238

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: QJS65_RS17630
• Genome accession: NZ_CP124831
• Coordinates: 3370079..3371254 (-)
• Length: 391 a.a.
• NCBI ID: WP_024719243.1
• Uniprot ID: A0A081LEM4
• Organism: Bacillus altitudinis strain Sample7_7
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3365079..3376254

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QJS65_RS17600 (QJS65_17600)	-	3365255..3365674 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
QJS65_RS17605 (QJS65_17605)	comFC	3365731..3366417 (-)	687	WP_206428014.1	ComF family protein	Machinery gene
QJS65_RS17610 (QJS65_17610)	-	3366414..3366707 (-)	294	WP_282745866.1	late competence development ComFB family protein	-
QJS65_RS17615 (QJS65_17615)	comFA	3366772..3367899 (-)	1128	WP_282745867.1	DEAD/DEAH box helicase	Machinery gene
QJS65_RS17620 (QJS65_17620)	-	3368271..3369113 (-)	843	WP_282745868.1	DegV family protein	-
QJS65_RS17625 (QJS65_17625)	degU	3369325..3370014 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
QJS65_RS17630 (QJS65_17630)	degS	3370079..3371254 (-)	1176	WP_024719243.1	sensor histidine kinase	Regulator
QJS65_RS17635 (QJS65_17635)	-	3371476..3372144 (+)	669	WP_017357860.1	YigZ family protein	-
QJS65_RS17640 (QJS65_17640)	-	3372129..3373226 (+)	1098	WP_282745872.1	LCP family protein	-
QJS65_RS17645 (QJS65_17645)	-	3373306..3374657 (+)	1352	WP_282745209.1	IS3 family transposase	-
QJS65_RS17650 (QJS65_17650)	-	3374706..3375773 (-)	1068	WP_024719245.1	MraY family glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45550.27 Da
• Isoelectric Point: 5.8757

>NTDB_id=828238 QJS65_RS17630 WP_024719243.1 3370079..3371254(-) (degS) [Bacillus altitudinis strain Sample7_7]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTENERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=828238 QJS65_RS17630 WP_024719243.1 3370079..3371254(-) (degS) [Bacillus altitudinis strain Sample7_7]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATTAAACAGCAAG
TCAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGATTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTGAGGGAAAGAAGAGATGATCTCGAAAGACGATTGTTAAGCTTACAAGACGTCATTGAAC
GTTCAGAAACGCTTGTGAGCCAGATCACGGTCGTCCTCAACTACTTGAACCAAGATTTACGTCAGGTCGGTGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAGGAAGAAGAGCGCAAAAGGGTATCACGAGA
AATCCATGATGGACCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCAGAACTAATTGAACGAATTTTTAGAGACCGTG
GAACAGAAGAAGGATTTAAAGAAATTAGAAGTCTAAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACACTGCGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAATGCCTAGGGGATACAGAAAATGAAAGAATTGCTTCTCAGTTCGAAGTGGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTGAAGCATTCCGAAGCTGAAGAAATCTCTGTAAAAGTAGAAGTG
ACAAAAGACTTTGTCACGTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAATAAAAACAA
ATCCTTTGGGTTACTTGGTATGAAAGAGCGCGTAGACTTACTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTAGAGTACCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A0A081LEM4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841