Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | QAO21_RS14365 | Genome accession | NZ_CP123149 |
| Coordinates | 2866099..2866569 (+) | Length | 156 a.a. |
| NCBI ID | WP_000934753.1 | Uniprot ID | A0A1S5YP95 |
| Organism | Staphylococcus aureus strain GE-MRSA19 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2840321..2872313 | 2866099..2866569 | within | 0 |
Gene organization within MGE regions
Location: 2840321..2872313
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QAO21_RS14190 (QAO21_14200) | groES | 2840321..2840605 (+) | 285 | WP_000917289.1 | co-chaperone GroES | - |
| QAO21_RS14195 (QAO21_14205) | groL | 2840681..2842297 (+) | 1617 | WP_000240645.1 | chaperonin GroEL | - |
| QAO21_RS14200 (QAO21_14210) | - | 2842392..2842938 (-) | 547 | Protein_2757 | site-specific integrase | - |
| QAO21_RS14205 (QAO21_14215) | - | 2842999..2843211 (+) | 213 | WP_000128898.1 | LuxR C-terminal-related transcriptional regulator | - |
| QAO21_RS14210 (QAO21_14220) | - | 2843208..2843798 (+) | 591 | WP_001293058.1 | terminase small subunit | - |
| QAO21_RS14215 (QAO21_14225) | - | 2844116..2844552 (+) | 437 | Protein_2760 | hypothetical protein | - |
| QAO21_RS14220 (QAO21_14230) | - | 2844658..2845101 (+) | 444 | WP_000022887.1 | GNAT family N-acetyltransferase | - |
| QAO21_RS14225 (QAO21_14235) | - | 2845954..2847261 (-) | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| QAO21_RS14230 (QAO21_14240) | - | 2847422..2848333 (+) | 912 | WP_000825510.1 | iron-hydroxamate ABC transporter substrate-binding protein | - |
| QAO21_RS14235 (QAO21_14245) | - | 2848395..2849240 (+) | 846 | WP_000812010.1 | class I SAM-dependent methyltransferase | - |
| QAO21_RS14240 (QAO21_14250) | - | 2849612..2850835 (-) | 1224 | WP_000206639.1 | ArgE/DapE family deacylase | - |
| QAO21_RS14245 (QAO21_14255) | lukH | 2851270..2852325 (+) | 1056 | WP_000791407.1 | bi-component leukocidin LukGH subunit H | - |
| QAO21_RS14250 (QAO21_14260) | lukG | 2852347..2853363 (+) | 1017 | WP_000595324.1 | bi-component leukocidin LukGH subunit G | - |
| QAO21_RS14255 (QAO21_14265) | sph | 2853601..2854425 (-) | 825 | Protein_2768 | sphingomyelin phosphodiesterase | - |
| QAO21_RS14260 (QAO21_14270) | - | 2854482..2855519 (-) | 1038 | WP_000857199.1 | tyrosine-type recombinase/integrase | - |
| QAO21_RS14265 (QAO21_14275) | - | 2855710..2856423 (-) | 714 | WP_001549185.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| QAO21_RS14270 (QAO21_14280) | - | 2856501..2856683 (-) | 183 | WP_000705246.1 | hypothetical protein | - |
| QAO21_RS14275 (QAO21_14285) | - | 2856887..2857228 (-) | 342 | WP_000591749.1 | hypothetical protein | - |
| QAO21_RS14280 (QAO21_14290) | - | 2857234..2858166 (-) | 933 | WP_000759682.1 | exonuclease domain-containing protein | - |
| QAO21_RS14285 (QAO21_14295) | - | 2858182..2858895 (-) | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| QAO21_RS14290 (QAO21_14300) | - | 2858858..2859031 (+) | 174 | WP_001801500.1 | hypothetical protein | - |
| QAO21_RS14295 (QAO21_14305) | - | 2859028..2859291 (+) | 264 | WP_000854072.1 | helix-turn-helix transcriptional regulator | - |
| QAO21_RS14300 (QAO21_14310) | - | 2859307..2859522 (+) | 216 | WP_001025404.1 | MW1434 family type I TA system toxin | - |
| QAO21_RS14305 (QAO21_14315) | - | 2859511..2859840 (-) | 330 | WP_000180411.1 | hypothetical protein | - |
| QAO21_RS14310 (QAO21_14320) | - | 2859891..2860643 (+) | 753 | WP_001148642.1 | phage antirepressor KilAC domain-containing protein | - |
| QAO21_RS14315 (QAO21_14325) | - | 2860659..2860835 (+) | 177 | WP_001001356.1 | hypothetical protein | - |
| QAO21_RS14320 (QAO21_14330) | - | 2860832..2861062 (-) | 231 | WP_000549548.1 | hypothetical protein | - |
| QAO21_RS14325 (QAO21_14335) | - | 2861121..2861441 (+) | 321 | WP_001120199.1 | DUF771 domain-containing protein | - |
| QAO21_RS14330 (QAO21_14340) | - | 2861438..2861599 (+) | 162 | WP_001285960.1 | DUF1270 domain-containing protein | - |
| QAO21_RS14335 (QAO21_14345) | - | 2861694..2861954 (+) | 261 | WP_001549178.1 | DUF2482 family protein | - |
| QAO21_RS14340 (QAO21_14350) | - | 2861994..2862254 (+) | 261 | WP_000291513.1 | DUF1108 family protein | - |
| QAO21_RS14345 (QAO21_14355) | - | 2862263..2862526 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| QAO21_RS14350 (QAO21_14360) | - | 2862535..2864478 (+) | 1944 | WP_000700561.1 | AAA family ATPase | - |
| QAO21_RS14355 (QAO21_14365) | - | 2864480..2865400 (+) | 921 | WP_000138475.1 | recombinase RecT | - |
| QAO21_RS14360 (QAO21_14370) | - | 2865481..2866098 (+) | 618 | WP_071665632.1 | MBL fold metallo-hydrolase | - |
| QAO21_RS14365 (QAO21_14375) | ssbA | 2866099..2866569 (+) | 471 | WP_000934753.1 | single-stranded DNA-binding protein | Machinery gene |
| QAO21_RS14370 (QAO21_14380) | - | 2866599..2867492 (+) | 894 | WP_000148333.1 | DnaD domain protein | - |
| QAO21_RS14375 (QAO21_14385) | - | 2867499..2867717 (+) | 219 | WP_000338530.1 | hypothetical protein | - |
| QAO21_RS14380 (QAO21_14390) | - | 2867726..2868130 (+) | 405 | WP_000401977.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QAO21_RS14385 (QAO21_14395) | - | 2868143..2868511 (+) | 369 | WP_000101288.1 | SA1788 family PVL leukocidin-associated protein | - |
| QAO21_RS14390 (QAO21_14400) | - | 2868515..2868757 (+) | 243 | WP_000131383.1 | phi PVL orf 51-like protein | - |
| QAO21_RS14395 (QAO21_14405) | - | 2868766..2869137 (+) | 372 | WP_001549172.1 | hypothetical protein | - |
| QAO21_RS14400 (QAO21_14410) | - | 2869130..2869366 (+) | 237 | WP_001065101.1 | DUF1024 family protein | - |
| QAO21_RS14405 (QAO21_14415) | - | 2869356..2869598 (+) | 243 | WP_000700108.1 | hypothetical protein | - |
| QAO21_RS14410 (QAO21_14420) | - | 2869591..2870124 (+) | 534 | WP_000181819.1 | dUTP diphosphatase | - |
| QAO21_RS14415 (QAO21_14425) | - | 2870161..2870406 (+) | 246 | WP_001282074.1 | hypothetical protein | - |
| QAO21_RS14420 (QAO21_14430) | - | 2870403..2870609 (+) | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| QAO21_RS14425 (QAO21_14435) | - | 2870606..2870992 (+) | 387 | WP_000592207.1 | hypothetical protein | - |
| QAO21_RS14430 (QAO21_14440) | rinB | 2870989..2871138 (+) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| QAO21_RS14435 (QAO21_14445) | - | 2871138..2871338 (+) | 201 | WP_000265043.1 | DUF1514 family protein | - |
| QAO21_RS14440 (QAO21_14450) | - | 2871366..2871782 (+) | 417 | WP_000590122.1 | hypothetical protein | - |
| QAO21_RS14445 (QAO21_14455) | - | 2872014..2872313 (+) | 300 | WP_000988336.1 | HNH endonuclease | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17668.55 Da Isoelectric Point: 5.2672
>NTDB_id=819553 QAO21_RS14365 WP_000934753.1 2866099..2866569(+) (ssbA) [Staphylococcus aureus strain GE-MRSA19]
MLNRTILVGRLTRDPELRTTQNGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
MLNRTILVGRLTRDPELRTTQNGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=819553 QAO21_RS14365 WP_000934753.1 2866099..2866569(+) (ssbA) [Staphylococcus aureus strain GE-MRSA19]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAATGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAATGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
56.497 |
100 |
0.641 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50 |
100 |
0.545 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
33.333 |
100 |
0.378 |
| ssb | Neisseria meningitidis MC58 |
33.526 |
100 |
0.372 |
| ssb | Neisseria gonorrhoeae MS11 |
33.526 |
100 |
0.372 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
47.5 |
76.923 |
0.365 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
47.5 |
76.923 |
0.365 |